Analysis of interatomic Contacts of Structural Units in PDB entry:
3NO1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3NO1 entry

There are 6 chains in PDB entry 3NO1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 20	VAL 385
B	LEU 20	TYR 383
C	GLY 19	SER 386
D	LEU 20	ARG 384
E	GLY 19	SER 386
F	GLY 19	GLN 382

There are 94 helices in PDB entry 3NO1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	73	84	Right-handed alpha
Helix 2	2	A	85	89	Right-handed 310
Helix 3	3	A	96	105	Right-handed alpha
Helix 4	4	A	106	109	Right-handed 310
Helix 5	5	A	114	137	Right-handed alpha
Helix 6	6	A	140	145	Right-handed alpha
Helix 7	7	A	167	178	Right-handed alpha
Helix 8	8	A	191	207	Right-handed alpha
Helix 9	9	A	221	232	Right-handed alpha
Helix 10	10	A	248	260	Right-handed alpha
Helix 11	11	A	272	283	Right-handed alpha
Helix 12	12	A	291	295	Right-handed 310
Helix 13	13	A	297	311	Right-handed alpha
Helix 14	14	A	320	331	Right-handed alpha
Helix 15	15	A	345	352	Right-handed alpha
Helix 16	16	A	376	384	Right-handed alpha
Helix 17	17	B	73	84	Right-handed alpha
Helix 18	18	B	85	90	Right-handed alpha
Helix 19	19	B	96	105	Right-handed alpha
Helix 20	20	B	106	109	Right-handed 310
Helix 21	21	B	114	137	Right-handed alpha
Helix 22	22	B	140	145	Right-handed alpha
Helix 23	23	B	167	178	Right-handed alpha
Helix 24	24	B	191	207	Right-handed alpha
Helix 25	25	B	221	232	Right-handed alpha
Helix 26	26	B	248	260	Right-handed alpha
Helix 27	27	B	272	283	Right-handed alpha
Helix 28	28	B	291	295	Right-handed 310
Helix 29	29	B	297	311	Right-handed alpha
Helix 30	30	B	320	331	Right-handed alpha
Helix 31	31	B	345	351	Right-handed alpha
Helix 32	32	C	73	84	Right-handed alpha
Helix 33	33	C	85	90	Right-handed alpha
Helix 34	34	C	96	105	Right-handed alpha
Helix 35	35	C	106	109	Right-handed 310
Helix 36	36	C	115	138	Right-handed alpha
Helix 37	37	C	140	145	Right-handed alpha
Helix 38	38	C	167	178	Right-handed alpha
Helix 39	39	C	191	207	Right-handed alpha
Helix 40	40	C	221	232	Right-handed alpha
Helix 41	41	C	248	260	Right-handed alpha
Helix 42	42	C	272	283	Right-handed alpha
Helix 43	43	C	291	295	Right-handed 310
Helix 44	44	C	297	311	Right-handed alpha
Helix 45	45	C	320	331	Right-handed alpha
Helix 46	46	C	345	352	Right-handed alpha
Helix 47	47	C	376	384	Right-handed alpha
Helix 48	48	D	73	84	Right-handed alpha
Helix 49	49	D	85	90	Right-handed alpha
Helix 50	50	D	96	105	Right-handed alpha
Helix 51	51	D	106	109	Right-handed 310
Helix 52	52	D	114	137	Right-handed alpha
Helix 53	53	D	140	145	Right-handed alpha
Helix 54	54	D	167	178	Right-handed alpha
Helix 55	55	D	191	207	Right-handed alpha
Helix 56	56	D	221	232	Right-handed alpha
Helix 57	57	D	248	260	Right-handed alpha
Helix 58	58	D	272	283	Right-handed alpha
Helix 59	59	D	297	312	Right-handed alpha
Helix 60	60	D	320	331	Right-handed alpha
Helix 61	61	D	345	351	Right-handed alpha
Helix 62	62	D	376	383	Right-handed alpha
Helix 63	63	E	73	84	Right-handed alpha
Helix 64	64	E	85	90	Right-handed alpha
Helix 65	65	E	96	105	Right-handed alpha
Helix 66	66	E	106	109	Right-handed 310
Helix 67	67	E	114	137	Right-handed alpha
Helix 68	68	E	140	145	Right-handed alpha
Helix 69	69	E	167	178	Right-handed alpha
Helix 70	70	E	191	207	Right-handed alpha
Helix 71	71	E	221	232	Right-handed alpha
Helix 72	72	E	248	260	Right-handed alpha
Helix 73	73	E	272	283	Right-handed alpha
Helix 74	74	E	291	295	Right-handed 310
Helix 75	75	E	297	311	Right-handed alpha
Helix 76	76	E	320	331	Right-handed alpha
Helix 77	77	E	345	351	Right-handed alpha
Helix 78	78	E	376	384	Right-handed alpha
Helix 79	79	F	73	84	Right-handed alpha
Helix 80	80	F	85	90	Right-handed alpha
Helix 81	81	F	96	105	Right-handed alpha
Helix 82	82	F	106	109	Right-handed 310
Helix 83	83	F	114	137	Right-handed alpha
Helix 84	84	F	140	145	Right-handed alpha
Helix 85	85	F	167	178	Right-handed alpha
Helix 86	86	F	191	207	Right-handed alpha
Helix 87	87	F	221	232	Right-handed alpha
Helix 88	88	F	248	260	Right-handed alpha
Helix 89	89	F	272	283	Right-handed alpha
Helix 90	90	F	291	295	Right-handed 310
Helix 91	91	F	297	311	Right-handed alpha
Helix 92	92	F	320	331	Right-handed alpha
Helix 93	93	F	342	344	Right-handed 310
Helix 94	94	F	345	351	Right-handed alpha

There are 18 sheets in PDB entry 3NO1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	32	first strand
Strand 2	A	48	57	anti-parallel
Strand 3	A	62	67	anti-parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	314	315	first strand
Strand 2	A	287	288	parallel
Strand 3	A	264	266	parallel
Strand 4	A	240	241	parallel
Strand 5	A	211	215	parallel
Strand 6	A	182	186	parallel
Strand 7	A	151	158	parallel
Strand 8	A	337	340	parallel

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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	314	315	first strand
Strand 2	A	287	288	parallel
Strand 3	A	264	266	parallel
Strand 4	A	240	241	parallel
Strand 5	A	211	215	parallel
Strand 6	A	182	186	parallel
Strand 7	A	151	158	parallel
Strand 8	A	362	364	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	30	first strand
Strand 2	B	50	57	anti-parallel
Strand 3	B	62	67	anti-parallel

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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	314	315	first strand
Strand 2	B	287	288	parallel
Strand 3	B	264	266	parallel
Strand 4	B	240	241	parallel
Strand 5	B	211	215	parallel
Strand 6	B	182	186	parallel
Strand 7	B	151	158	parallel
Strand 8	B	337	340	parallel

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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	314	315	first strand
Strand 2	B	287	288	parallel
Strand 3	B	264	266	parallel
Strand 4	B	240	241	parallel
Strand 5	B	211	215	parallel
Strand 6	B	182	186	parallel
Strand 7	B	151	158	parallel
Strand 8	B	362	364	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	22	32	first strand
Strand 2	C	48	57	anti-parallel
Strand 3	C	62	67	anti-parallel

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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	314	315	first strand
Strand 2	C	287	288	parallel
Strand 3	C	264	266	parallel
Strand 4	C	240	241	parallel
Strand 5	C	211	215	parallel
Strand 6	C	182	186	parallel
Strand 7	C	151	158	parallel
Strand 8	C	337	340	parallel

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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	314	315	first strand
Strand 2	C	287	288	parallel
Strand 3	C	264	266	parallel
Strand 4	C	240	241	parallel
Strand 5	C	211	215	parallel
Strand 6	C	182	186	parallel
Strand 7	C	151	158	parallel
Strand 8	C	362	364	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	22	30	first strand
Strand 2	D	50	57	anti-parallel
Strand 3	D	62	67	anti-parallel

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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	314	315	first strand
Strand 2	D	287	288	parallel
Strand 3	D	264	266	parallel
Strand 4	D	240	241	parallel
Strand 5	D	211	215	parallel
Strand 6	D	182	186	parallel
Strand 7	D	151	158	parallel
Strand 8	D	337	339	parallel

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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	314	315	first strand
Strand 2	D	287	288	parallel
Strand 3	D	264	266	parallel
Strand 4	D	240	241	parallel
Strand 5	D	211	215	parallel
Strand 6	D	182	186	parallel
Strand 7	D	151	158	parallel
Strand 8	D	362	364	anti-parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	22	30	first strand
Strand 2	E	50	57	anti-parallel
Strand 3	E	62	67	anti-parallel

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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	314	315	first strand
Strand 2	E	287	288	parallel
Strand 3	E	264	266	parallel
Strand 4	E	240	241	parallel
Strand 5	E	211	215	parallel
Strand 6	E	182	186	parallel
Strand 7	E	151	158	parallel
Strand 8	E	337	339	parallel

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There are 8 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	314	315	first strand
Strand 2	E	287	288	parallel
Strand 3	E	264	266	parallel
Strand 4	E	240	241	parallel
Strand 5	E	211	215	parallel
Strand 6	E	182	186	parallel
Strand 7	E	151	158	parallel
Strand 8	E	362	364	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	22	30	first strand
Strand 2	F	50	57	anti-parallel
Strand 3	F	62	67	anti-parallel

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There are 8 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	314	315	first strand
Strand 2	F	287	288	parallel
Strand 3	F	264	266	parallel
Strand 4	F	240	241	parallel
Strand 5	F	211	215	parallel
Strand 6	F	182	186	parallel
Strand 7	F	151	158	parallel
Strand 8	F	337	340	parallel

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There are 8 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	314	315	first strand
Strand 2	F	287	288	parallel
Strand 3	F	264	266	parallel
Strand 4	F	240	241	parallel
Strand 5	F	211	215	parallel
Strand 6	F	182	186	parallel
Strand 7	F	151	158	parallel
Strand 8	F	362	364	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3NO1

Analysis of interatomic Contacts of Structural Units in PDB entry:
3NO1