Analysis of interatomic Contacts of Structural Units in PDB entry:
3NXQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3NXQ entry

There are 2 chains in PDB entry 3NXQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1GLY 610
B
 LEU 1GLY 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 3NXQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 6Right-handed 310
Helix 2
2
A
13 44Right-handed alpha
Helix 3
3
A
47 77Right-handed alpha
Helix 4
4
A
79 83Right-handed 310
Helix 5
5
A
85 96Right-handed alpha
Helix 6
6
A
98 103Right-handed 310
Helix 7
7
A
104 125Right-handed alpha
Helix 8
8
A
141 150Right-handed alpha
Helix 9
9
A
152 188Right-handed alpha
Helix 10
10
A
193 201Right-handed alpha
Helix 11
11
A
206 238Right-handed alpha
Helix 12
12
A
261 263Right-handed 310
Helix 13
13
A
264 269Right-handed alpha
Helix 14
14
A
279 287Right-handed alpha
Helix 15
15
A
289 304Right-handed alpha
Helix 16
16
A
310 317Right-handed alpha
Helix 17
17
A
352 372Right-handed alpha
Helix 18
18
A
376 380Right-handed 310
Helix 19
19
A
384 400Right-handed alpha
Helix 20
20
A
401 408Right-handed alpha
Helix 21
21
A
417 433Right-handed alpha
Helix 22
22
A
435 451Right-handed alpha
Helix 23
23
A
455 457Right-handed 310
Helix 24
24
A
458 472Right-handed alpha
Helix 25
25
A
484 489Right-handed 310
Helix 26
26
A
498 519Right-handed alpha
Helix 27
27
A
524 528Right-handed 310
Helix 28
28
A
533 547Right-handed alpha
Helix 29
29
A
551 561Right-handed alpha
Helix 30
30
A
567 589Right-handed alpha
Helix 31
31
B
2 6Right-handed 310
Helix 32
32
B
13 44Right-handed alpha
Helix 33
33
B
47 77Right-handed alpha
Helix 34
34
B
79 83Right-handed 310
Helix 35
35
B
85 96Right-handed alpha
Helix 36
36
B
98 103Right-handed 310
Helix 37
37
B
104 125Right-handed alpha
Helix 38
38
B
141 150Right-handed alpha
Helix 39
39
B
152 188Right-handed alpha
Helix 40
40
B
193 201Right-handed alpha
Helix 41
41
B
206 238Right-handed alpha
Helix 42
42
B
261 263Right-handed 310
Helix 43
43
B
264 269Right-handed alpha
Helix 44
44
B
279 287Right-handed alpha
Helix 45
45
B
289 304Right-handed alpha
Helix 46
46
B
310 317Right-handed alpha
Helix 47
47
B
352 372Right-handed alpha
Helix 48
48
B
376 380Right-handed 310
Helix 49
49
B
384 400Right-handed alpha
Helix 50
50
B
401 408Right-handed alpha
Helix 51
51
B
417 433Right-handed alpha
Helix 52
52
B
434 451Right-handed alpha
Helix 53
53
B
455 457Right-handed 310
Helix 54
54
B
458 472Right-handed alpha
Helix 55
55
B
484 489Right-handed 310
Helix 56
56
B
498 519Right-handed alpha
Helix 57
57
B
524 528Right-handed 310
Helix 58
58
B
533 546Right-handed alpha
Helix 59
59
B
551 561Right-handed alpha
Helix 60
60
B
567 588Right-handed alpha
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There are 5 sheets in PDB entry 3NXQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 128first strand
Strand 2
A
136 138anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
473 474parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 336first strand
Strand 2
A
343 346anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 249first strand
Strand 2
B
473 474parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 336first strand
Strand 2
B
343 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il