Analysis of interatomic Contacts of Structural Units in PDB entry:
3O0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3O0G entry

There are 4 chains in PDB entry 3O0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 289
D
 GLN 145SER 293
B
 LYS 6ASP 288
E
 GLN 145SER 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3O0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 56Right-handed alpha
Helix 2
2
A
87 94Right-handed alpha
Helix 3
3
A
99 120Right-handed alpha
Helix 4
4
A
128 130Right-handed 310
Helix 5
5
A
164 168Right-handed 310
Helix 6
6
A
169 174Right-handed alpha
Helix 7
7
A
181 196Right-handed alpha
Helix 8
8
A
207 220Right-handed alpha
Helix 9
9
A
229 233Right-handed 310
Helix 10
10
A
256 267Right-handed alpha
Helix 11
11
A
270 274Right-handed 310
Helix 12
12
A
276 282Right-handed alpha
Helix 13
13
A
283 287Right-handed 310
Helix 14
14
D
147 163Right-handed alpha
Helix 15
15
D
171 188Right-handed alpha
Helix 16
16
D
197 212Right-handed alpha
Helix 17
17
D
218 238Right-handed alpha
Helix 18
18
D
245 249Right-handed 310
Helix 19
19
D
253 278Right-handed alpha
Helix 20
20
D
278 291Right-handed alpha
Helix 21
21
B
45 56Right-handed alpha
Helix 22
22
B
87 94Right-handed alpha
Helix 23
23
B
99 120Right-handed alpha
Helix 24
24
B
128 130Right-handed 310
Helix 25
25
B
164 168Right-handed 310
Helix 26
26
B
169 174Right-handed alpha
Helix 27
27
B
181 196Right-handed alpha
Helix 28
28
B
207 220Right-handed alpha
Helix 29
29
B
227 233Right-handed 310
Helix 30
30
B
256 267Right-handed alpha
Helix 31
31
B
270 274Right-handed 310
Helix 32
32
B
276 282Right-handed alpha
Helix 33
33
B
283 287Right-handed 310
Helix 34
34
E
147 163Right-handed alpha
Helix 35
35
E
171 189Right-handed alpha
Helix 36
36
E
197 212Right-handed alpha
Helix 37
37
E
218 238Right-handed alpha
Helix 38
38
E
245 249Right-handed 310
Helix 39
39
E
254 278Right-handed alpha
Helix 40
40
E
278 291Right-handed alpha
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There are 6 sheets in PDB entry 3O0G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 12first strand
Strand 2
A
17 23anti-parallel
Strand 3
A
29 36anti-parallel
Strand 4
A
75 81anti-parallel
Strand 5
A
66 72anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
A
132 134anti-parallel
Strand 3
A
140 142anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
149 150anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 21first strand
Strand 2
B
30 35anti-parallel
Strand 3
B
75 81anti-parallel
Strand 4
B
66 72anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 86first strand
Strand 2
B
132 134anti-parallel
Strand 3
B
140 142anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 123first strand
Strand 2
B
149 150anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il