Analysis of interatomic Contacts of Structural Units in PDB entry:
3OEY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OEY entry

There is 1 chain in PDB entry 3OEY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 3LEU 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3OEY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
20 32Right-handed alpha
Helix 2
2
A
43 52Right-handed alpha
Helix 3
3
A
67 83Right-handed alpha
Helix 4
4
A
99 103Right-handed 310
Helix 5
5
A
107 111Right-handed 310
Helix 6
6
A
112 124Right-handed alpha
Helix 7
7
A
124 135Right-handed alpha
Helix 8
8
A
158 181Right-handed alpha
Helix 9
9
A
196 204Right-handed alpha
Helix 10
10
A
208 226Right-handed alpha
Helix 11
11
A
235 247Right-handed alpha
Helix 12
12
A
263 267Right-handed 310
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There is 1 sheet ( A) in PDB entry 3OEY.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
60 62first strand
Strand 2
A
35 40parallel
Strand 3
A
9 12parallel
Strand 4
A
88 93parallel
Strand 5
A
138 148parallel
Strand 6
A
185 191parallel
Strand 7
A
256 260parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il