Analysis of interatomic Contacts of Structural Units in PDB entry:
3OIO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OIO entry

There is 1 chain in PDB entry 3OIO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 214GLY 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3OIO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
214 217Right-handed 310
Helix 2
2
A
218 230Right-handed alpha
Helix 3
3
A
237 246Right-handed alpha
Helix 4
4
A
248 260Right-handed alpha
Helix 5
5
A
263 283Right-handed alpha
Helix 6
6
A
286 294Right-handed alpha
Helix 7
7
A
298 311Right-handed alpha
Helix 8
8
A
313 320Right-handed alpha
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There are no sheets in PDB entry 3OIO

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il