Analysis of interatomic Contacts of Structural Units in PDB entry:
3OW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OW5 entry

There is 1 chain in PDB entry 3OW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9SER 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 3OW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
93 97Right-handed 310
Helix 2
2
A
175 181Right-handed alpha
Helix 3
3
A
193 211Right-handed alpha
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There are 4 sheets in PDB entry 3OW5. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
39 42parallel
Strand 3
A
57 60parallel
Strand 4
A
79 82parallel
Strand 5
A
120 127parallel
Strand 6
A
138 144parallel
Strand 7
A
160 161parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
44 46parallel
Strand 3
A
66 68parallel
Strand 4
A
107 109parallel
Strand 5
A
120 127parallel
Strand 6
A
138 144parallel
Strand 7
A
155 157parallel
Strand 8
A
172 173parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
51 52parallel
Strand 3
A
73 74parallel
Strand 4
A
114 115parallel
Strand 5
A
132 133parallel
Strand 6
A
149 150parallel
Strand 7
A
166 167parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
103 105anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il