Analysis of interatomic Contacts of Structural Units in PDB entry:
3P06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P06 entry

There is 1 chain in PDB entry 3P06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 637ALA 830
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 3P06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
670 674Right-handed 310
Helix 2
2
A
699 704Right-handed alpha
Helix 3
3
A
739 748Right-handed alpha
Helix 4
4
A
773 781Right-handed alpha
Helix 5
5
A
781 786Right-handed alpha
Helix 6
6
A
801 810Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3P06. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 642first strand
Strand 2
A
724 728anti-parallel
Strand 3
A
719 720anti-parallel
Strand 4
A
819 820anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 684first strand
Strand 2
A
690 694anti-parallel
Strand 3
A
711 717parallel
Strand 4
A
657 667anti-parallel
Strand 5
A
645 654anti-parallel
Strand 6
A
828 829anti-parallel
Strand 7
A
734 735parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 759first strand
Strand 2
A
789 791parallel
Strand 3
A
797 798parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
763 764first strand
Strand 2
A
767 768anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il