Analysis of interatomic Contacts of Structural Units in PDB entry:
3P7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P7I entry

There is 1 chain in PDB entry 3P7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5MET 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3P7I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 36Right-handed alpha
Helix 2
2
A
46 56Right-handed alpha
Helix 3
3
A
65 76Right-handed alpha
Helix 4
4
A
107 114Right-handed alpha
Helix 5
5
A
115 117Right-handed 310
Helix 6
6
A
131 138Right-handed alpha
Helix 7
7
A
139 143Right-handed 310
Helix 8
8
A
145 149Right-handed 310
Helix 9
9
A
156 166Right-handed alpha
Helix 10
10
A
176 181Right-handed alpha
Helix 11
11
A
181 186Right-handed alpha
Helix 12
12
A
186 191Right-handed alpha
Helix 13
13
A
214 228Right-handed alpha
Helix 14
14
A
231 242Right-handed alpha
Helix 15
15
A
250 253Right-handed 310
Helix 16
16
A
254 271Right-handed alpha
Helix 17
17
A
276 304Right-handed alpha
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There are 2 sheets in PDB entry 3P7I. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
7 11parallel
Strand 3
A
61 63parallel
Strand 4
A
206 210anti-parallel
Strand 5
A
78 86anti-parallel
Strand 6
A
243 248anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
119 122parallel
Strand 3
A
171 175parallel
Strand 4
A
95 100anti-parallel
Strand 5
A
193 198anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il