Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q5U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q5U entry

There are 2 chains in PDB entry 3Q5U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 75SER 497
B
 GLY 273ASN 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3Q5U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
77 87Right-handed alpha
Helix 2
2
A
89 104Right-handed alpha
Helix 3
3
A
111 118Right-handed alpha
Helix 4
4
A
119 128Right-handed alpha
Helix 5
5
A
133 149Right-handed alpha
Helix 6
6
A
151 161Right-handed alpha
Helix 7
7
A
162 171Right-handed alpha
Helix 8
8
A
175 191Right-handed alpha
Helix 9
9
A
193 203Right-handed alpha
Helix 10
10
A
205 212Right-handed alpha
Helix 11
11
A
217 221Right-handed 310
Helix 12
12
A
222 236Right-handed alpha
Helix 13
13
A
245 261Right-handed alpha
Helix 14
14
A
264 279Right-handed alpha
Helix 15
15
A
282 291Right-handed alpha
Helix 16
16
A
294 303Right-handed alpha
Helix 17
17
A
306 321Right-handed alpha
Helix 18
18
A
324 334Right-handed alpha
Helix 19
19
A
335 338Right-handed 310
Helix 20
20
A
339 344Right-handed alpha
Helix 21
21
A
348 364Right-handed alpha
Helix 22
22
A
366 376Right-handed alpha
Helix 23
23
A
377 388Right-handed alpha
Helix 24
24
A
390 408Right-handed alpha
Helix 25
25
A
409 419Right-handed alpha
Helix 26
26
A
421 429Right-handed alpha
Helix 27
27
A
433 453Right-handed alpha
Helix 28
28
A
456 467Right-handed alpha
Helix 29
29
A
468 476Right-handed alpha
Helix 30
30
A
477 479Right-handed 310
Helix 31
31
A
481 496Right-handed alpha
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There are no sheets in PDB entry 3Q5U
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il