Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q71 entry

There is 1 chain in PDB entry 3Q71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 989ASN 1191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3Q71. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1022 1026Right-handed 310
Helix 2
2
A
1044 1055Right-handed alpha
Helix 3
3
A
1056 1068Right-handed alpha
Helix 4
4
A
1101 1122Right-handed alpha
Helix 5
5
A
1140 1159Right-handed alpha
Helix 6
6
A
1175 1191Right-handed alpha
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There are 2 sheets in PDB entry 3Q71. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
994 996first strand
Strand 2
A
1003 1005anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1007 1009first strand
Strand 2
A
1015 1020anti-parallel
Strand 3
A
1166 1171parallel
Strand 4
A
1126 1130parallel
Strand 5
A
1030 1034parallel
Strand 6
A
1088 1092parallel
Strand 7
A
1076 1080anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il