Analysis of interatomic Contacts of Structural Units in PDB entry:
3QN3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QN3 entry

There are 4 chains in PDB entry 3QN3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 0LEU 414
B
ALA 0LEU 414
C
ALA 0LEU 414
D
ALA 0GLY 30
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 3QN3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
56 61Right-handed 310
Helix 2
2
A
63 72Right-handed alpha
Helix 3
3
A
72 79Right-handed alpha
Helix 4
4
A
85 98Right-handed alpha
Helix 5
5
A
106 125Right-handed alpha
Helix 6
6
A
128 135Right-handed alpha
Helix 7
7
A
136 138Right-handed 310
Helix 8
8
A
152 155Right-handed 310
Helix 9
9
A
173 195Right-handed alpha
Helix 10
10
A
215 228Right-handed alpha
Helix 11
11
A
241 244Right-handed 310
Helix 12
12
A
259 274Right-handed alpha
Helix 13
13
A
287 299Right-handed alpha
Helix 14
14
A
313 324Right-handed alpha
Helix 15
15
A
332 337Right-handed alpha
Helix 16
16
A
338 352Right-handed alpha
Helix 17
17
A
368 377Right-handed alpha
Helix 18
18
A
389 403Right-handed alpha
Helix 19
19
B
56 61Right-handed 310
Helix 20
20
B
63 72Right-handed alpha
Helix 21
21
B
72 79Right-handed alpha
Helix 22
22
B
85 98Right-handed alpha
Helix 23
23
B
106 125Right-handed alpha
Helix 24
24
B
128 135Right-handed alpha
Helix 25
25
B
152 155Right-handed 310
Helix 26
26
B
173 195Right-handed alpha
Helix 27
27
B
215 229Right-handed alpha
Helix 28
28
B
241 244Right-handed 310
Helix 29
29
B
259 274Right-handed alpha
Helix 30
30
B
287 299Right-handed alpha
Helix 31
31
B
313 323Right-handed alpha
Helix 32
32
B
332 337Right-handed alpha
Helix 33
33
B
338 352Right-handed alpha
Helix 34
34
B
368 377Right-handed alpha
Helix 35
35
B
389 406Right-handed alpha
Helix 36
36
C
56 61Right-handed 310
Helix 37
37
C
63 72Right-handed alpha
Helix 38
38
C
72 79Right-handed alpha
Helix 39
39
C
85 98Right-handed alpha
Helix 40
40
C
106 125Right-handed alpha
Helix 41
41
C
128 135Right-handed alpha
Helix 42
42
C
136 138Right-handed 310
Helix 43
43
C
152 155Right-handed 310
Helix 44
44
C
173 195Right-handed alpha
Helix 45
45
C
215 229Right-handed alpha
Helix 46
46
C
241 244Right-handed 310
Helix 47
47
C
259 274Right-handed alpha
Helix 48
48
C
287 299Right-handed alpha
Helix 49
49
C
313 323Right-handed alpha
Helix 50
50
C
332 337Right-handed alpha
Helix 51
51
C
338 352Right-handed alpha
Helix 52
52
C
368 377Right-handed alpha
Helix 53
53
C
389 403Right-handed alpha
Helix 54
54
D
56 61Right-handed 310
Helix 55
55
D
63 72Right-handed alpha
Helix 56
56
D
72 79Right-handed alpha
Helix 57
57
D
85 98Right-handed alpha
Helix 58
58
D
106 125Right-handed alpha
Helix 59
59
D
128 135Right-handed alpha
Helix 60
60
D
136 138Right-handed 310
Helix 61
61
D
152 155Right-handed 310
Helix 62
62
D
173 195Right-handed alpha
Helix 63
63
D
215 229Right-handed alpha
Helix 64
64
D
241 244Right-handed 310
Helix 65
65
D
259 274Right-handed alpha
Helix 66
66
D
287 299Right-handed alpha
Helix 67
67
D
313 324Right-handed alpha
Helix 68
68
D
332 337Right-handed alpha
Helix 69
69
D
338 352Right-handed alpha
Helix 70
70
D
368 377Right-handed alpha
Helix 71
71
D
389 403Right-handed alpha
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There are 14 sheets in PDB entry 3QN3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
4 13first strand
Strand 2
A
19 27anti-parallel
Strand 3
A
32 36anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
140 141first strand
Strand 2
A
408 409parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
143 144first strand
Strand 2
A
381 383parallel
Strand 3
A
355 359parallel
Strand 4
A
328 331parallel
Strand 5
A
303 306parallel
Strand 6
A
276 280parallel
Strand 7
A
234 239parallel
Strand 8
A
163 168anti-parallel
Strand 9
A
146 150anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
246 247first strand
Strand 2
A
250 253anti-parallel
Strand 3
A
256 258anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4 13first strand
Strand 2
B
19 27anti-parallel
Strand 3
B
32 36anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
140 141first strand
Strand 2
B
408 409parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
143 144first strand
Strand 2
B
381 383parallel
Strand 3
B
355 359parallel
Strand 4
B
328 331parallel
Strand 5
B
303 306parallel
Strand 6
B
276 280parallel
Strand 7
B
234 239parallel
Strand 8
B
163 168anti-parallel
Strand 9
B
146 150anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
246 247first strand
Strand 2
B
250 253anti-parallel
Strand 3
B
256 258anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
4 13first strand
Strand 2
C
19 27anti-parallel
Strand 3
C
32 36anti-parallel
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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
143 144first strand
Strand 2
C
380 383parallel
Strand 3
C
355 359parallel
Strand 4
C
328 331parallel
Strand 5
C
303 306parallel
Strand 6
C
276 280parallel
Strand 7
C
234 239parallel
Strand 8
C
163 168anti-parallel
Strand 9
C
146 150anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
246 247first strand
Strand 2
C
250 253anti-parallel
Strand 3
C
256 258anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
4 13first strand
Strand 2
D
19 27anti-parallel
Strand 3
D
32 36anti-parallel
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There are 9 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
143 144first strand
Strand 2
D
380 383parallel
Strand 3
D
355 359parallel
Strand 4
D
328 331parallel
Strand 5
D
303 306parallel
Strand 6
D
276 280parallel
Strand 7
D
234 239parallel
Strand 8
D
163 168anti-parallel
Strand 9
D
146 150anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
246 247first strand
Strand 2
D
250 253anti-parallel
Strand 3
D
256 258anti-parallel
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