Analysis of interatomic Contacts of Structural Units in PDB entry:
3QTM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QTM entry

There are 4 chains in PDB entry 3QTM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 59VAL 257
A
 SER 259TYR 391
B
 THR 61VAL 257
B
 SER 259SER 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3QTM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
61 82Right-handed alpha
Helix 2
2
A
84 106Right-handed alpha
Helix 3
3
A
108 112Right-handed 310
Helix 4
4
A
113 130Right-handed alpha
Helix 5
5
A
130 135Right-handed alpha
Helix 6
6
A
136 138Right-handed 310
Helix 7
7
A
143 158Right-handed alpha
Helix 8
8
A
159 161Right-handed 310
Helix 9
9
A
165 190Right-handed alpha
Helix 10
10
A
197 218Right-handed alpha
Helix 11
11
A
234 245Right-handed alpha
Helix 12
12
A
246 249Right-handed 310
Helix 13
13
A
250 268Right-handed alpha
Helix 14
14
A
275 302Right-handed alpha
Helix 15
15
A
308 333Right-handed alpha
Helix 16
16
A
335 337Right-handed 310
Helix 17
17
A
338 353Right-handed alpha
Helix 18
18
A
355 376Right-handed alpha
Helix 19
19
A
381 391Right-handed alpha
Helix 20
20
B
61 82Right-handed alpha
Helix 21
21
B
84 105Right-handed alpha
Helix 22
22
B
108 112Right-handed 310
Helix 23
23
B
113 130Right-handed alpha
Helix 24
24
B
130 135Right-handed alpha
Helix 25
25
B
136 138Right-handed 310
Helix 26
26
B
143 158Right-handed alpha
Helix 27
27
B
159 161Right-handed 310
Helix 28
28
B
165 190Right-handed alpha
Helix 29
29
B
191 194Right-handed 310
Helix 30
30
B
197 217Right-handed alpha
Helix 31
31
B
229 233Right-handed 310
Helix 32
32
B
234 245Right-handed alpha
Helix 33
33
B
246 249Right-handed 310
Helix 34
34
B
250 268Right-handed alpha
Helix 35
35
B
275 303Right-handed alpha
Helix 36
36
B
308 333Right-handed alpha
Helix 37
37
B
337 353Right-handed alpha
Helix 38
38
B
355 376Right-handed alpha
Helix 39
39
B
381 392Right-handed alpha
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There are no sheets in PDB entry 3QTM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il