Analysis of interatomic Contacts of Structural Units in PDB entry:
3QVN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QVN entry

There is 1 chain in PDB entry 3QVN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3QVN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
25 55Right-handed alpha
Helix 3
3
A
56 58Right-handed 310
Helix 4
4
A
59 86Right-handed alpha
Helix 5
5
A
89 93Right-handed 310
Helix 6
6
A
102 112Right-handed alpha
Helix 7
7
A
114 129Right-handed alpha
Helix 8
8
A
172 181Right-handed alpha
Helix 9
9
A
183 191Right-handed alpha
Helix 10
10
A
192 195Right-handed 310
Helix 11
11
A
196 204Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3QVN.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 153first strand
Strand 2
A
133 140anti-parallel
Strand 3
A
163 170anti-parallel
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