Analysis of interatomic Contacts of Structural Units in PDB entry:
3QY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QY7 entry

There is 1 chain in PDB entry 3QY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3QY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 32Right-handed alpha
Helix 2
2
A
51 69Right-handed alpha
Helix 3
3
A
86 93Right-handed alpha
Helix 4
4
A
98 102Right-handed 310
Helix 5
5
A
117 128Right-handed alpha
Helix 6
6
A
137 139Right-handed 310
Helix 7
7
A
140 146Right-handed alpha
Helix 8
8
A
147 156Right-handed alpha
Helix 9
9
A
164 169Right-handed alpha
Helix 10
10
A
172 185Right-handed alpha
Helix 11
11
A
204 217Right-handed alpha
Helix 12
12
A
218 233Right-handed alpha
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There are 3 sheets in PDB entry 3QY7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
36 38parallel
Strand 3
A
74 76parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
48 49anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
104 108parallel
Strand 3
A
131 135parallel
Strand 4
A
159 163parallel
Strand 5
A
190 192parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il