Analysis of interatomic Contacts of Structural Units in PDB entry:
3R6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3R6O entry

There is 1 chain in PDB entry 3R6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1PRO 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3R6O. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
41 47Right-handed alpha
Helix 2
2
A
48 59Right-handed alpha
Helix 3
3
A
69 73Right-handed 310
Helix 4
4
A
114 116Right-handed 310
Helix 5
5
A
152 158Right-handed 310
Helix 6
6
A
172 176Right-handed alpha
Helix 7
7
A
188 194Right-handed alpha
Helix 8
8
A
234 236Right-handed 310
Helix 9
9
A
239 249Right-handed alpha
Helix 10
10
A
267 271Right-handed 310
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There are 4 sheets in PDB entry 3R6O. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
24 27first strand
Strand 2
A
16 21anti-parallel
Strand 3
A
4 7anti-parallel
Strand 4
A
205 207anti-parallel
Strand 5
A
160 167anti-parallel
Strand 6
A
138 144anti-parallel
Strand 7
A
258 260anti-parallel
Strand 8
A
85 89parallel
Strand 9
A
109 113anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
118 119first strand
Strand 2
A
199 200parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
125 127first strand
Strand 2
A
291 299parallel
Strand 3
A
282 287anti-parallel
Strand 4
A
218 223anti-parallel
Strand 5
A
226 232anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
134 135first strand
Strand 2
A
170 171anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il