Analysis of interatomic Contacts of Structural Units in PDB entry:
3RC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RC9 entry

There is 1 chain in PDB entry 3RC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 8PRO 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3RC9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 24Right-handed alpha
Helix 2
2
A
24 32Right-handed alpha
Helix 3
3
A
44 56Right-handed alpha
Helix 4
4
A
62 68Right-handed alpha
Helix 5
5
A
80 82Right-handed 310
Helix 6
6
A
83 94Right-handed alpha
Helix 7
7
A
107 121Right-handed alpha
Helix 8
8
A
129 134Right-handed 310
Helix 9
9
A
135 146Right-handed alpha
Helix 10
10
A
177 183Right-handed alpha
Helix 11
11
A
184 196Right-handed alpha
Helix 12
12
A
286 302Right-handed alpha
Helix 13
13
A
305 326Right-handed alpha
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There are 2 sheets in PDB entry 3RC9. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
35 42parallel
Strand 3
A
10 15parallel
Strand 4
A
74 77parallel
Strand 5
A
97 101parallel
Strand 6
A
125 128parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 281first strand
Strand 2
A
268 273anti-parallel
Strand 3
A
252 256anti-parallel
Strand 4
A
241 248anti-parallel
Strand 5
A
152 160anti-parallel
Strand 6
A
229 235parallel
Strand 7
A
214 223anti-parallel
Strand 8
A
200 209anti-parallel
Strand 9
A
327 331parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il