Analysis of interatomic Contacts of Structural Units in PDB entry:
3RLH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RLH entry

There is 1 chain in PDB entry 3RLH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2LYS 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3RLH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 26Right-handed alpha
Helix 2
2
A
62 74Right-handed alpha
Helix 3
3
A
94 97Right-handed 310
Helix 4
4
A
98 100Right-handed 310
Helix 5
5
A
101 117Right-handed alpha
Helix 6
6
A
118 122Right-handed 310
Helix 7
7
A
135 138Right-handed 310
Helix 8
8
A
139 152Right-handed alpha
Helix 9
9
A
154 159Right-handed 310
Helix 10
10
A
175 187Right-handed alpha
Helix 11
11
A
207 218Right-handed alpha
Helix 12
12
A
234 245Right-handed alpha
Helix 13
13
A
253 262Right-handed alpha
Helix 14
14
A
263 268Right-handed alpha
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There are 2 sheets in PDB entry 3RLH. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 165first strand
Strand 2
A
128 133parallel
Strand 3
A
87 92parallel
Strand 4
A
30 35parallel
Strand 5
A
5 11parallel
Strand 6
A
248 251parallel
Strand 7
A
226 230parallel
Strand 8
A
193 197parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 165first strand
Strand 2
A
128 133parallel
Strand 3
A
87 92parallel
Strand 4
A
30 35parallel
Strand 5
A
5 11parallel
Strand 6
A
270 272parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il