Analysis of interatomic Contacts of Structural Units in PDB entry:
3S5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3S5N entry

There is 1 chain in PDB entry 3S5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 33LEU 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3S5N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 65Right-handed alpha
Helix 2
2
A
76 84Right-handed 310
Helix 3
3
A
85 99Right-handed alpha
Helix 4
4
A
114 128Right-handed alpha
Helix 5
5
A
141 145Right-handed 310
Helix 6
6
A
146 161Right-handed alpha
Helix 7
7
A
170 175Right-handed alpha
Helix 8
8
A
179 188Right-handed alpha
Helix 9
9
A
201 212Right-handed alpha
Helix 10
10
A
223 225Right-handed 310
Helix 11
11
A
226 234Right-handed alpha
Helix 12
12
A
241 245Right-handed 310
Helix 13
13
A
246 259Right-handed alpha
Helix 14
14
A
261 279Right-handed alpha
Helix 15
15
A
283 295Right-handed alpha
Helix 16
16
A
310 323Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3S5N.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 39first strand
Strand 2
A
237 239parallel
Strand 3
A
218 221parallel
Strand 4
A
192 197parallel
Strand 5
A
165 169parallel
Strand 6
A
132 136parallel
Strand 7
A
105 109parallel
Strand 8
A
71 74parallel
Strand 9
A
41 42parallel
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