Analysis of interatomic Contacts of Structural Units in PDB entry:
3S95


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3S95 entry

There are 2 chains in PDB entry 3S95 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1SER 637
B
 SER -1SER 637
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3S95. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
335 337Right-handed 310
Helix 2
2
A
374 389Right-handed alpha
Helix 3
3
A
420 428Right-handed alpha
Helix 4
4
A
433 454Right-handed alpha
Helix 5
5
A
512 516Right-handed 310
Helix 6
6
A
517 522Right-handed alpha
Helix 7
7
A
528 545Right-handed alpha
Helix 8
8
A
562 570Right-handed alpha
Helix 9
9
A
578 587Right-handed alpha
Helix 10
10
A
590 594Right-handed 310
Helix 11
11
A
596 614Right-handed alpha
Helix 12
12
A
617 635Right-handed alpha
Helix 13
13
B
335 337Right-handed 310
Helix 14
14
B
374 389Right-handed alpha
Helix 15
15
B
420 428Right-handed alpha
Helix 16
16
B
433 454Right-handed alpha
Helix 17
17
B
512 516Right-handed 310
Helix 18
18
B
517 522Right-handed alpha
Helix 19
19
B
528 545Right-handed alpha
Helix 20
20
B
562 570Right-handed alpha
Helix 21
21
B
578 587Right-handed alpha
Helix 22
22
B
590 594Right-handed 310
Helix 23
23
B
596 614Right-handed alpha
Helix 24
24
B
617 634Right-handed alpha
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There are 6 sheets in PDB entry 3S95. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 334first strand
Strand 2
A
399 405parallel
Strand 3
A
408 414anti-parallel
Strand 4
A
364 370anti-parallel
Strand 5
A
351 358anti-parallel
Strand 6
A
339 346anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 457first strand
Strand 2
A
483 484anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 468first strand
Strand 2
A
474 476anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 334first strand
Strand 2
B
399 405parallel
Strand 3
B
408 414anti-parallel
Strand 4
B
364 370anti-parallel
Strand 5
B
351 358anti-parallel
Strand 6
B
339 347anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
456 457first strand
Strand 2
B
483 484anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 468first strand
Strand 2
B
474 476anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il