Analysis of interatomic Contacts of Structural Units in PDB entry:
3THW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3THW entry

There are 2 chains in PDB entry 3THW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 11ILE 930
B
 SER 216TYR 620
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 3THW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
47 57Right-handed alpha
Helix 3
3
A
81 95Right-handed alpha
Helix 4
4
A
131 136Right-handed alpha
Helix 5
5
A
184 195Right-handed alpha
Helix 6
6
A
209 220Right-handed alpha
Helix 7
7
A
228 233Right-handed 310
Helix 8
8
A
236 245Right-handed alpha
Helix 9
9
A
258 262Right-handed 310
Helix 10
10
A
263 277Right-handed alpha
Helix 11
11
A
278 286Right-handed 310
Helix 12
12
A
303 310Right-handed alpha
Helix 13
13
A
325 331Right-handed alpha
Helix 14
14
A
335 348Right-handed alpha
Helix 15
15
A
352 368Right-handed alpha
Helix 16
16
A
369 379Right-handed alpha
Helix 17
17
A
380 384Right-handed 310
Helix 18
18
A
386 396Right-handed alpha
Helix 19
19
A
401 412Right-handed alpha
Helix 20
20
A
413 423Right-handed alpha
Helix 21
21
A
430 435Right-handed alpha
Helix 22
22
A
436 456Right-handed alpha
Helix 23
23
A
462 466Right-handed 310
Helix 24
24
A
475 492Right-handed alpha
Helix 25
25
A
493 498Right-handed alpha
Helix 26
26
A
498 503Right-handed alpha
Helix 27
27
A
555 586Right-handed alpha
Helix 28
28
A
588 614Right-handed alpha
Helix 29
29
A
639 644Right-handed alpha
Helix 30
30
A
674 692Right-handed alpha
Helix 31
31
A
723 737Right-handed alpha
Helix 32
32
A
755 771Right-handed alpha
Helix 33
33
A
784 793Right-handed 310
Helix 34
34
A
826 834Right-handed alpha
Helix 35
35
A
839 851Right-handed alpha
Helix 36
36
A
867 893Right-handed alpha
Helix 37
37
A
900 919Right-handed alpha
Helix 38
38
A
920 929Right-handed alpha
Helix 39
39
B
221 232Right-handed alpha
Helix 40
40
B
251 261Right-handed alpha
Helix 41
41
B
280 291Right-handed alpha
Helix 42
42
B
303 308Right-handed alpha
Helix 43
43
B
402 413Right-handed alpha
Helix 44
44
B
424 438Right-handed alpha
Helix 45
45
B
455 467Right-handed alpha
Helix 46
46
B
487 502Right-handed alpha
Helix 47
47
B
506 514Right-handed 310
Helix 48
48
B
529 536Right-handed alpha
Helix 49
49
B
550 556Right-handed alpha
Helix 50
50
B
560 573Right-handed alpha
Helix 51
51
B
577 594Right-handed alpha
Helix 52
52
B
596 609Right-handed alpha
Helix 53
53
B
611 621Right-handed alpha
Helix 54
54
B
625 643Right-handed alpha
Helix 55
55
B
646 653Right-handed alpha
Helix 56
56
B
658 670Right-handed alpha
Helix 57
57
B
672 679Right-handed alpha
Helix 58
58
B
681 688Right-handed alpha
Helix 59
59
B
700 719Right-handed alpha
Helix 60
60
B
720 728Right-handed alpha
Helix 61
61
B
750 755Right-handed 310
Helix 62
62
B
773 806Right-handed alpha
Helix 63
63
B
808 834Right-handed alpha
Helix 64
64
B
857 862Right-handed alpha
Helix 65
65
B
890 910Right-handed alpha
Helix 66
66
B
942 957Right-handed alpha
Helix 67
67
B
973 991Right-handed alpha
Helix 68
68
B
1002 1006Right-handed 310
Helix 69
69
B
1007 1012Right-handed alpha
Helix 70
70
B
1058 1065Right-handed alpha
Helix 71
71
B
1070 1103Right-handed alpha
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There are 13 sheets in PDB entry 3THW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 67first strand
Strand 2
A
75 80anti-parallel
Strand 3
A
43 46anti-parallel
Strand 4
A
33 38anti-parallel
Strand 5
A
99 105parallel
Strand 6
A
117 123anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 227first strand
Strand 2
A
198 202parallel
Strand 3
A
147 152parallel
Strand 4
A
160 167anti-parallel
Strand 5
A
172 179anti-parallel
Strand 6
A
290 293parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
707 711parallel
Strand 3
A
744 748parallel
Strand 4
A
777 781parallel
Strand 5
A
664 668parallel
Strand 6
A
797 807parallel
Strand 7
A
810 819anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 514first strand
Strand 2
A
522 524anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
540 544first strand
Strand 2
A
549 552anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
623 625first strand
Strand 2
A
699 703parallel
Strand 3
A
632 637anti-parallel
Strand 4
A
653 657anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 268first strand
Strand 2
B
271 277anti-parallel
Strand 3
B
246 250anti-parallel
Strand 4
B
237 243anti-parallel
Strand 5
B
294 300parallel
Strand 6
B
319 325anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
338 339first strand
Strand 2
B
346 347anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
445 449first strand
Strand 2
B
416 420parallel
Strand 3
B
359 365parallel
Strand 4
B
377 385anti-parallel
Strand 5
B
390 398anti-parallel
Strand 6
B
516 518parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
527 528first strand
Strand 2
B
925 929parallel
Strand 3
B
962 966parallel
Strand 4
B
995 999parallel
Strand 5
B
882 886parallel
Strand 6
B
1016 1023parallel
Strand 7
B
1048 1052anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
736 738first strand
Strand 2
B
741 748anti-parallel
Strand 3
B
768 772anti-parallel
Strand 4
B
760 764anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
837 838first strand
Strand 2
B
913 914anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
841 843first strand
Strand 2
B
917 921parallel
Strand 3
B
847 853anti-parallel
Strand 4
B
871 875anti-parallel
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