Analysis of interatomic Contacts of Structural Units in PDB entry:
3TLW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TLW entry

There are 4 chains in PDB entry 3TLW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5PHE 315
B
 VAL 5PHE 315
C
 VAL 5PHE 315
D
 VAL 5LEU 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 3TLW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 53Right-handed 310
Helix 2
2
A
67 71Right-handed 310
Helix 3
3
A
146 149Right-handed 310
Helix 4
4
A
196 201Right-handed alpha
Helix 5
5
A
201 213Right-handed alpha
Helix 6
6
A
214 218Right-handed 310
Helix 7
7
A
220 243Right-handed alpha
Helix 8
8
A
253 282Right-handed alpha
Helix 9
9
A
284 315Right-handed alpha
Helix 10
10
B
50 53Right-handed 310
Helix 11
11
B
55 60Right-handed alpha
Helix 12
12
B
67 71Right-handed 310
Helix 13
13
B
146 149Right-handed 310
Helix 14
14
B
196 201Right-handed alpha
Helix 15
15
B
201 213Right-handed alpha
Helix 16
16
B
214 218Right-handed 310
Helix 17
17
B
220 243Right-handed alpha
Helix 18
18
B
253 282Right-handed alpha
Helix 19
19
B
284 315Right-handed alpha
Helix 20
20
C
50 53Right-handed 310
Helix 21
21
C
55 60Right-handed alpha
Helix 22
22
C
67 71Right-handed 310
Helix 23
23
C
146 149Right-handed 310
Helix 24
24
C
196 201Right-handed alpha
Helix 25
25
C
201 213Right-handed alpha
Helix 26
26
C
214 218Right-handed 310
Helix 27
27
C
220 242Right-handed alpha
Helix 28
28
C
253 282Right-handed alpha
Helix 29
29
C
284 315Right-handed alpha
Helix 30
30
D
50 53Right-handed 310
Helix 31
31
D
55 60Right-handed alpha
Helix 32
32
D
67 71Right-handed 310
Helix 33
33
D
146 149Right-handed 310
Helix 34
34
D
196 201Right-handed alpha
Helix 35
35
D
201 213Right-handed alpha
Helix 36
36
D
214 218Right-handed 310
Helix 37
37
D
220 243Right-handed alpha
Helix 38
38
D
253 282Right-handed alpha
Helix 39
39
D
284 315Right-handed alpha
Helix 40
40
E
50 53Right-handed 310
Helix 41
41
E
55 60Right-handed alpha
Helix 42
42
E
67 71Right-handed 310
Helix 43
43
E
146 149Right-handed 310
Helix 44
44
E
196 201Right-handed alpha
Helix 45
45
E
201 213Right-handed alpha
Helix 46
46
E
214 218Right-handed 310
Helix 47
47
E
220 243Right-handed alpha
Helix 48
48
E
253 282Right-handed alpha
Helix 49
49
E
284 315Right-handed alpha
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There are 15 sheets in PDB entry 3TLW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
86 94anti-parallel
Strand 3
A
99 111anti-parallel
Strand 4
A
36 48anti-parallel
Strand 5
A
16 31anti-parallel
Strand 6
A
140 144parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
86 94anti-parallel
Strand 3
A
99 111anti-parallel
Strand 4
A
36 48anti-parallel
Strand 5
A
16 31anti-parallel
Strand 6
A
150 151parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 78first strand
Strand 2
A
123 133anti-parallel
Strand 3
A
179 192anti-parallel
Strand 4
A
160 176anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
86 94anti-parallel
Strand 3
B
99 111anti-parallel
Strand 4
B
36 48anti-parallel
Strand 5
B
16 31anti-parallel
Strand 6
B
140 144parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
86 94anti-parallel
Strand 3
B
99 111anti-parallel
Strand 4
B
36 48anti-parallel
Strand 5
B
16 31anti-parallel
Strand 6
B
150 151parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 78first strand
Strand 2
B
123 133anti-parallel
Strand 3
B
179 192anti-parallel
Strand 4
B
160 176anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 65first strand
Strand 2
C
86 94anti-parallel
Strand 3
C
99 111anti-parallel
Strand 4
C
36 48anti-parallel
Strand 5
C
16 31anti-parallel
Strand 6
C
140 144parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 65first strand
Strand 2
C
86 94anti-parallel
Strand 3
C
99 111anti-parallel
Strand 4
C
36 48anti-parallel
Strand 5
C
16 31anti-parallel
Strand 6
C
150 151parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
76 78first strand
Strand 2
C
123 133anti-parallel
Strand 3
C
179 192anti-parallel
Strand 4
C
160 176anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
64 65first strand
Strand 2
D
86 94anti-parallel
Strand 3
D
99 111anti-parallel
Strand 4
D
36 48anti-parallel
Strand 5
D
16 31anti-parallel
Strand 6
D
140 144parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
64 65first strand
Strand 2
D
86 94anti-parallel
Strand 3
D
99 111anti-parallel
Strand 4
D
36 48anti-parallel
Strand 5
D
16 31anti-parallel
Strand 6
D
150 151parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
76 78first strand
Strand 2
D
123 133anti-parallel
Strand 3
D
179 192anti-parallel
Strand 4
D
160 176anti-parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
64 65first strand
Strand 2
E
86 94anti-parallel
Strand 3
E
99 111anti-parallel
Strand 4
E
36 48anti-parallel
Strand 5
E
16 31anti-parallel
Strand 6
E
140 144parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
64 65first strand
Strand 2
E
86 94anti-parallel
Strand 3
E
99 111anti-parallel
Strand 4
E
36 48anti-parallel
Strand 5
E
16 31anti-parallel
Strand 6
E
150 151parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
76 78first strand
Strand 2
E
123 133anti-parallel
Strand 3
E
179 192anti-parallel
Strand 4
E
160 176anti-parallel
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