Analysis of interatomic Contacts of Structural Units in PDB entry:
3TZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TZY entry

There are 4 chains in PDB entry 3TZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 596PRO 1059
B
 LEU 597PHE 1062
C
 ASP 2VAL 11
D
 ASP 2VAL 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 3TZY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
601 616Right-handed alpha
Helix 2
2
A
633 650Right-handed alpha
Helix 3
3
A
650 655Right-handed alpha
Helix 4
4
A
657 668Right-handed alpha
Helix 5
5
A
681 694Right-handed alpha
Helix 6
6
A
727 734Right-handed alpha
Helix 7
7
A
734 753Right-handed alpha
Helix 8
8
A
755 762Right-handed alpha
Helix 9
9
A
768 790Right-handed alpha
Helix 10
10
A
803 811Right-handed alpha
Helix 11
11
A
815 836Right-handed alpha
Helix 12
12
A
837 842Right-handed 310
Helix 13
13
A
851 859Right-handed alpha
Helix 14
14
A
860 862Right-handed 310
Helix 15
15
A
881 895Right-handed alpha
Helix 16
16
A
910 915Right-handed 310
Helix 17
17
A
916 924Right-handed alpha
Helix 18
18
A
955 965Right-handed alpha
Helix 19
19
A
968 979Right-handed alpha
Helix 20
20
A
991 1004Right-handed alpha
Helix 21
21
A
1020 1035Right-handed alpha
Helix 22
22
A
1040 1045Right-handed 310
Helix 23
23
A
1050 1054Right-handed 310
Helix 24
24
B
601 616Right-handed alpha
Helix 25
25
B
633 650Right-handed alpha
Helix 26
26
B
650 655Right-handed alpha
Helix 27
27
B
657 667Right-handed alpha
Helix 28
28
B
681 694Right-handed alpha
Helix 29
29
B
727 734Right-handed alpha
Helix 30
30
B
734 753Right-handed alpha
Helix 31
31
B
755 762Right-handed alpha
Helix 32
32
B
768 790Right-handed alpha
Helix 33
33
B
803 811Right-handed alpha
Helix 34
34
B
815 834Right-handed alpha
Helix 35
35
B
838 842Right-handed 310
Helix 36
36
B
851 857Right-handed alpha
Helix 37
37
B
881 894Right-handed alpha
Helix 38
38
B
910 915Right-handed 310
Helix 39
39
B
916 925Right-handed alpha
Helix 40
40
B
955 965Right-handed alpha
Helix 41
41
B
968 979Right-handed alpha
Helix 42
42
B
991 1004Right-handed alpha
Helix 43
43
B
1020 1035Right-handed alpha
Helix 44
44
B
1040 1045Right-handed 310
Helix 45
45
B
1050 1054Right-handed 310
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There are 7 sheets in PDB entry 3TZY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
625 631first strand
Strand 2
A
673 679anti-parallel
Strand 3
A
701 704anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
944 946first strand
Strand 2
A
935 938anti-parallel
Strand 3
A
796 799parallel
Strand 4
A
713 716parallel
Strand 5
A
983 986parallel
Strand 6
A
1010 1012parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
866 872first strand
Strand 2
A
875 880anti-parallel
Strand 3
A
844 848anti-parallel
Strand 4
A
899 902anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
625 631first strand
Strand 2
B
673 679anti-parallel
Strand 3
B
701 704anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
944 946first strand
Strand 2
B
935 938anti-parallel
Strand 3
B
796 799parallel
Strand 4
B
713 716parallel
Strand 5
B
983 986parallel
Strand 6
B
1010 1012parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
866 872first strand
Strand 2
B
875 880anti-parallel
Strand 3
B
844 848anti-parallel
Strand 4
B
899 902anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 4first strand
Strand 2
D
10 11anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il