Analysis of interatomic Contacts of Structural Units in PDB entry:
3U44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U44 entry

There are 3 chains in PDB entry 3U44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 10LEU 1232
B
GLY 2ALA 1160
X
T 1 T 47
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are106 helices in PDB entry 3U44. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
12 21Right-handed alpha
Helix 2
2
A
35 49Right-handed alpha
Helix 3
3
A
56 58Right-handed 310
Helix 4
4
A
66 88Right-handed alpha
Helix 5
5
A
91 101Right-handed alpha
Helix 6
6
A
109 121Right-handed alpha
Helix 7
7
A
122 124Right-handed 310
Helix 8
8
A
134 157Right-handed alpha
Helix 9
9
A
158 169Right-handed alpha
Helix 10
10
A
174 189Right-handed alpha
Helix 11
11
A
193 200Right-handed alpha
Helix 12
12
A
201 206Right-handed alpha
Helix 13
13
A
218 244Right-handed alpha
Helix 14
14
A
256 270Right-handed alpha
Helix 15
15
A
273 281Right-handed alpha
Helix 16
16
A
299 324Right-handed alpha
Helix 17
17
A
327 363Right-handed alpha
Helix 18
18
A
367 380Right-handed alpha
Helix 19
19
A
391 401Right-handed alpha
Helix 20
20
A
408 412Right-handed 310
Helix 21
21
A
413 424Right-handed alpha
Helix 22
22
A
438 442Right-handed 310
Helix 23
23
A
450 461Right-handed alpha
Helix 24
24
A
481 496Right-handed alpha
Helix 25
25
A
497 502Right-handed alpha
Helix 26
26
A
546 565Right-handed alpha
Helix 27
27
A
594 605Right-handed alpha
Helix 28
28
A
620 635Right-handed alpha
Helix 29
29
A
638 647Right-handed alpha
Helix 30
30
A
654 665Right-handed alpha
Helix 31
31
A
669 681Right-handed alpha
Helix 32
32
A
685 708Right-handed alpha
Helix 33
33
A
709 722Right-handed alpha
Helix 34
34
A
722 728Right-handed alpha
Helix 35
35
A
732 752Right-handed alpha
Helix 36
36
A
757 771Right-handed alpha
Helix 37
37
A
794 796Right-handed 310
Helix 38
38
A
845 873Right-handed alpha
Helix 39
39
A
886 898Right-handed alpha
Helix 40
40
A
906 912Right-handed alpha
Helix 41
41
A
916 926Right-handed alpha
Helix 42
42
A
940 945Right-handed alpha
Helix 43
43
A
973 979Right-handed alpha
Helix 44
44
A
990 999Right-handed alpha
Helix 45
45
A
1004 1008Right-handed 310
Helix 46
46
A
1056 1071Right-handed alpha
Helix 47
47
A
1078 1092Right-handed alpha
Helix 48
48
A
1096 1103Right-handed alpha
Helix 49
49
A
1104 1110Right-handed alpha
Helix 50
50
A
1111 1113Right-handed 310
Helix 51
51
A
1114 1122Right-handed alpha
Helix 52
52
A
1139 1141Right-handed 310
Helix 53
53
A
1188 1197Right-handed alpha
Helix 54
54
A
1197 1213Right-handed alpha
Helix 55
55
B
13 29Right-handed alpha
Helix 56
56
B
40 42Right-handed 310
Helix 57
57
B
43 52Right-handed alpha
Helix 58
58
B
67 80Right-handed alpha
Helix 59
59
B
88 103Right-handed alpha
Helix 60
60
B
104 107Right-handed 310
Helix 61
61
B
117 133Right-handed alpha
Helix 62
62
B
136 145Right-handed alpha
Helix 63
63
B
154 176Right-handed alpha
Helix 64
64
B
184 194Right-handed alpha
Helix 65
65
B
214 228Right-handed alpha
Helix 66
66
B
252 269Right-handed alpha
Helix 67
67
B
287 297Right-handed alpha
Helix 68
68
B
319 337Right-handed alpha
Helix 69
69
B
341 343Right-handed 310
Helix 70
70
B
351 354Right-handed 310
Helix 71
71
B
355 366Right-handed alpha
Helix 72
72
B
381 396Right-handed alpha
Helix 73
73
B
399 408Right-handed alpha
Helix 74
74
B
418 436Right-handed alpha
Helix 75
75
B
440 445Right-handed alpha
Helix 76
76
B
465 495Right-handed alpha
Helix 77
77
B
497 511Right-handed alpha
Helix 78
78
B
513 528Right-handed alpha
Helix 79
79
B
530 555Right-handed alpha
Helix 80
80
B
561 576Right-handed alpha
Helix 81
81
B
625 634Right-handed alpha
Helix 82
82
B
644 659Right-handed alpha
Helix 83
83
B
682 692Right-handed alpha
Helix 84
84
B
703 707Right-handed 310
Helix 85
85
B
708 713Right-handed alpha
Helix 86
86
B
718 735Right-handed alpha
Helix 87
87
B
741 751Right-handed alpha
Helix 88
88
B
752 754Right-handed 310
Helix 89
89
B
755 765Right-handed alpha
Helix 90
90
B
766 768Right-handed 310
Helix 91
91
B
776 785Right-handed alpha
Helix 92
92
B
791 801Right-handed alpha
Helix 93
93
B
801 809Right-handed alpha
Helix 94
94
B
822 844Right-handed alpha
Helix 95
95
B
847 851Right-handed 310
Helix 96
96
B
852 868Right-handed alpha
Helix 97
97
B
869 871Right-handed 310
Helix 98
98
B
874 878Right-handed 310
Helix 99
99
B
879 905Right-handed alpha
Helix 100
100
B
970 976Right-handed alpha
Helix 101
101
B
980 998Right-handed alpha
Helix 102
102
B
1023 1034Right-handed alpha
Helix 103
103
B
1044 1052Right-handed alpha
Helix 104
104
B
1081 1105Right-handed alpha
Helix 105
105
B
1126 1131Right-handed alpha
Helix 106
106
B
1148 1160Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 3U44. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
105 108first strand
Strand 2
A
60 64parallel
Strand 3
A
403 406parallel
Strand 4
A
433 437parallel
Strand 5
A
26 30parallel
Strand 6
A
470 474parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
131 132first strand
Strand 2
A
365 366parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
476 477first strand
Strand 2
A
512 513parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
609 611first strand
Strand 2
A
788 792parallel
Strand 3
A
585 589parallel
Strand 4
A
801 806parallel
Strand 5
A
874 883parallel
Strand 6
A
525 530parallel
Strand 7
A
949 954parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
822 825first strand
Strand 2
A
829 836anti-parallel
Strand 3
A
841 844anti-parallel
Strand 4
B
1016 1017parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1030 1031first strand
Strand 2
A
1013 1016parallel
Strand 3
A
1151 1163parallel
Strand 4
A
1168 1174anti-parallel
Strand 5
A
1216 1223parallel
Strand 6
A
1228 1232anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1030 1031first strand
Strand 2
A
1013 1016parallel
Strand 3
A
1151 1163parallel
Strand 4
A
1125 1137anti-parallel
Strand 5
B
59 60anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
63 66first strand
Strand 2
B
35 38parallel
Strand 3
B
204 207parallel
Strand 4
B
230 236parallel
Strand 5
B
3 8parallel
Strand 6
B
273 278parallel
Back to list of sheets
Back to top of page

There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
370 372first strand
Strand 2
B
588 592parallel
Strand 3
B
345 349parallel
Strand 4
B
603 607parallel
Strand 5
B
664 670parallel
Strand 6
B
312 317parallel
Strand 7
B
697 700parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
910 918first strand
Strand 2
B
941 951anti-parallel
Strand 3
B
954 963anti-parallel
Strand 4
B
1002 1010parallel
Strand 5
B
1038 1042anti-parallel
Strand 6
B
1079 1080parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
927 931first strand
Strand 2
B
935 939anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1058 1059first strand
Strand 2
B
1066 1067anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1113 1114first strand
Strand 2
B
1142 1143parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il