Analysis of interatomic Contacts of Structural Units in PDB entry:
3UIB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UIB entry

There is 1 chain in PDB entry 3UIB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 7PHE 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3UIB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 13Right-handed 310
Helix 2
2
A
68 85Right-handed alpha
Helix 3
3
A
119 124Right-handed alpha
Helix 4
4
A
131 152Right-handed alpha
Helix 5
5
A
193 198Right-handed 310
Helix 6
6
A
200 205Right-handed alpha
Helix 7
7
A
213 229Right-handed alpha
Helix 8
8
A
237 250Right-handed alpha
Helix 9
9
A
253 258Right-handed alpha
Helix 10
10
A
259 261Right-handed 310
Helix 11
11
A
262 269Right-handed alpha
Helix 12
12
A
280 285Right-handed alpha
Helix 13
13
A
289 300Right-handed alpha
Helix 14
14
A
309 316Right-handed alpha
Helix 15
15
A
317 320Right-handed 310
Helix 16
16
A
324 329Right-handed 310
Helix 17
17
A
345 356Right-handed alpha
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There are 2 sheets in PDB entry 3UIB. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
47 52anti-parallel
Strand 3
A
109 113anti-parallel
Strand 4
A
93 95anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
164 166anti-parallel
Strand 3
A
172 174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il