Analysis of interatomic Contacts of Structural Units in PDB entry:
3UKG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UKG entry

There are 3 chains in PDB entry 3UKG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 360ASN 601
C
 G 1 T 31
D
 A 1 C 31
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3UKG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
364 378Right-handed alpha
Helix 2
2
A
385 392Right-handed alpha
Helix 3
3
A
399 411Right-handed alpha
Helix 4
4
A
412 415Right-handed 310
Helix 5
5
A
450 471Right-handed alpha
Helix 6
6
A
522 533Right-handed alpha
Helix 7
7
A
537 548Right-handed alpha
Helix 8
8
A
548 553Right-handed alpha
Helix 9
9
A
553 567Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3UKG.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
437 438anti-parallel
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