Analysis of interatomic Contacts of Structural Units in PDB entry:
3UMN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UMN entry

There are 3 chains in PDB entry 3UMN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 431THR 548
B
 ILE 432LYS 547
C
 SER 431THR 548
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3UMN

There are 8 sheets in PDB entry 3UMN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 438first strand
Strand 2
A
538 546anti-parallel
Strand 3
A
527 532anti-parallel
Strand 4
A
470 475anti-parallel
Strand 5
A
478 483anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 447first strand
Strand 2
A
453 458anti-parallel
Strand 3
A
495 500anti-parallel
Strand 4
A
512 515parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 465first strand
Strand 2
A
489 490anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
478 483first strand
Strand 2
B
470 475anti-parallel
Strand 3
B
527 532anti-parallel
Strand 4
B
538 545anti-parallel
Strand 5
B
433 438anti-parallel
Strand 6
C
432 438anti-parallel
Strand 7
C
538 546anti-parallel
Strand 8
C
527 532anti-parallel
Strand 9
C
470 475anti-parallel
Strand 10
C
478 483anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
442 447first strand
Strand 2
B
453 458anti-parallel
Strand 3
B
495 500anti-parallel
Strand 4
B
512 515parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 465first strand
Strand 2
B
489 490anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
442 447first strand
Strand 2
C
453 458anti-parallel
Strand 3
C
495 499anti-parallel
Strand 4
C
512 514parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
464 465first strand
Strand 2
C
489 490anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il