Analysis of interatomic Contacts of Structural Units in PDB entry:
3UOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UOV entry

There are 2 chains in PDB entry 3UOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6ALA 545
B
 LYS 6ALA 545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3UOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 31Right-handed alpha
Helix 2
2
A
46 51Right-handed alpha
Helix 3
3
A
61 66Right-handed alpha
Helix 4
4
A
66 71Right-handed alpha
Helix 5
5
A
85 101Right-handed alpha
Helix 6
6
A
102 104Right-handed 310
Helix 7
7
A
156 160Right-handed 310
Helix 8
8
A
168 170Right-handed 310
Helix 9
9
A
194 205Right-handed alpha
Helix 10
10
A
230 240Right-handed alpha
Helix 11
11
A
240 249Right-handed alpha
Helix 12
12
A
263 267Right-handed 310
Helix 13
13
A
268 281Right-handed alpha
Helix 14
14
A
285 290Right-handed alpha
Helix 15
15
A
298 317Right-handed alpha
Helix 16
16
A
319 326Right-handed alpha
Helix 17
17
A
343 348Right-handed alpha
Helix 18
18
A
394 399Right-handed 310
Helix 19
19
A
403 407Right-handed 310
Helix 20
20
A
408 413Right-handed alpha
Helix 21
21
A
436 440Right-handed 310
Helix 22
22
A
445 468Right-handed alpha
Helix 23
23
A
475 492Right-handed alpha
Helix 24
24
A
494 499Right-handed alpha
Helix 25
25
A
523 537Right-handed alpha
Helix 26
26
B
18 31Right-handed alpha
Helix 27
27
B
46 51Right-handed alpha
Helix 28
28
B
61 66Right-handed alpha
Helix 29
29
B
66 71Right-handed alpha
Helix 30
30
B
85 101Right-handed alpha
Helix 31
31
B
102 104Right-handed 310
Helix 32
32
B
156 160Right-handed 310
Helix 33
33
B
168 170Right-handed 310
Helix 34
34
B
194 205Right-handed alpha
Helix 35
35
B
230 240Right-handed alpha
Helix 36
36
B
240 251Right-handed alpha
Helix 37
37
B
263 267Right-handed 310
Helix 38
38
B
268 281Right-handed alpha
Helix 39
39
B
285 290Right-handed alpha
Helix 40
40
B
298 317Right-handed alpha
Helix 41
41
B
319 326Right-handed alpha
Helix 42
42
B
343 348Right-handed alpha
Helix 43
43
B
394 399Right-handed 310
Helix 44
44
B
403 407Right-handed 310
Helix 45
45
B
408 413Right-handed alpha
Helix 46
46
B
436 444Right-handed 310
Helix 47
47
B
445 468Right-handed alpha
Helix 48
48
B
475 492Right-handed alpha
Helix 49
49
B
494 499Right-handed alpha
Helix 50
50
B
523 537Right-handed alpha
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There are 15 sheets in PDB entry 3UOV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
35 38parallel
Strand 3
A
10 15parallel
Strand 4
A
132 141parallel
Strand 5
A
123 128anti-parallel
Strand 6
A
112 118anti-parallel
Strand 7
A
400 402parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
35 38parallel
Strand 3
A
10 15parallel
Strand 4
A
132 141parallel
Strand 5
A
431 433parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
389 390anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
382 385parallel
Strand 3
A
187 191parallel
Strand 4
A
210 215parallel
Strand 5
A
353 357parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
340 341parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 367first strand
Strand 2
A
370 373anti-parallel
Strand 3
A
377 379anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 474first strand
Strand 2
A
542 544anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
503 507first strand
Strand 2
A
513 517anti-parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
35 38parallel
Strand 3
B
10 15parallel
Strand 4
B
133 141parallel
Strand 5
B
123 128anti-parallel
Strand 6
B
112 118anti-parallel
Strand 7
B
400 402parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
35 38parallel
Strand 3
B
10 15parallel
Strand 4
B
133 141parallel
Strand 5
B
431 433parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 166first strand
Strand 2
B
382 385parallel
Strand 3
B
187 191parallel
Strand 4
B
210 215parallel
Strand 5
B
353 357parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 223first strand
Strand 2
B
340 341parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
363 367first strand
Strand 2
B
370 373anti-parallel
Strand 3
B
377 379anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
472 474first strand
Strand 2
B
542 544anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
503 507first strand
Strand 2
B
513 517anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il