Analysis of interatomic Contacts of Structural Units in PDB entry:
3VOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VOL entry

There is 1 chain in PDB entry 3VOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 169GLY 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3VOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
170 180Right-handed alpha
Helix 2
2
A
199 209Right-handed alpha
Helix 3
3
A
209 215Right-handed alpha
Helix 4
4
A
229 234Right-handed 310
Helix 5
5
A
236 247Right-handed alpha
Helix 6
6
A
286 305Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3VOL.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
185 190anti-parallel
Strand 3
A
276 285anti-parallel
Strand 4
A
260 270anti-parallel
Strand 5
A
251 257anti-parallel
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