Analysis of interatomic Contacts of Structural Units in PDB entry:
3VT0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3VT0 entry

There are 6 chains in PDB entry 3VT0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 33	VAL 493
B	GLU 33	VAL 493
C	GLY -18	VAL 493
D	GLU 33	VAL 493
E	GLU 33	VAL 493
F	GLU 33	VAL 493

There are 53 helices in PDB entry 3VT0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	103	107	Right-handed 310
Helix 2	2	A	304	309	Right-handed 310
Helix 3	3	A	311	315	Right-handed 310
Helix 4	4	A	372	374	Right-handed 310
Helix 5	5	A	389	392	Right-handed 310
Helix 6	6	A	419	421	Right-handed 310
Helix 7	7	A	436	438	Right-handed 310
Helix 8	8	A	466	468	Right-handed 310
Helix 9	9	A	483	486	Right-handed 310
Helix 10	10	B	304	309	Right-handed 310
Helix 11	11	B	311	315	Right-handed 310
Helix 12	12	B	372	374	Right-handed 310
Helix 13	13	B	389	392	Right-handed 310
Helix 14	14	B	419	421	Right-handed 310
Helix 15	15	B	436	438	Right-handed 310
Helix 16	16	B	466	468	Right-handed 310
Helix 17	17	B	483	486	Right-handed 310
Helix 18	18	C	103	107	Right-handed 310
Helix 19	19	C	163	167	Right-handed 310
Helix 20	20	C	304	309	Right-handed 310
Helix 21	21	C	311	315	Right-handed 310
Helix 22	22	C	372	374	Right-handed 310
Helix 23	23	C	389	392	Right-handed 310
Helix 24	24	C	419	421	Right-handed 310
Helix 25	25	C	436	439	Right-handed 310
Helix 26	26	C	466	468	Right-handed 310
Helix 27	27	C	483	486	Right-handed 310
Helix 28	28	D	103	107	Right-handed 310
Helix 29	29	D	163	167	Right-handed 310
Helix 30	30	D	304	309	Right-handed 310
Helix 31	31	D	311	315	Right-handed 310
Helix 32	32	D	372	374	Right-handed 310
Helix 33	33	D	419	421	Right-handed 310
Helix 34	34	D	436	440	Right-handed 310
Helix 35	35	D	466	468	Right-handed 310
Helix 36	36	E	103	107	Right-handed 310
Helix 37	37	E	163	167	Right-handed 310
Helix 38	38	E	304	309	Right-handed 310
Helix 39	39	E	311	315	Right-handed 310
Helix 40	40	E	372	374	Right-handed 310
Helix 41	41	E	389	392	Right-handed 310
Helix 42	42	E	419	421	Right-handed 310
Helix 43	43	E	436	439	Right-handed 310
Helix 44	44	E	466	468	Right-handed 310
Helix 45	45	E	483	486	Right-handed 310
Helix 46	46	F	103	107	Right-handed 310
Helix 47	47	F	304	309	Right-handed 310
Helix 48	48	F	311	315	Right-handed 310
Helix 49	49	F	372	374	Right-handed 310
Helix 50	50	F	389	392	Right-handed 310
Helix 51	51	F	419	421	Right-handed 310
Helix 52	52	F	436	439	Right-handed 310
Helix 53	53	F	466	468	Right-handed 310

There are 66 sheets in PDB entry 3VT0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, BN,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	343	341	anti-parallel
Strand 3	A	346	349	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	60	first strand
Strand 2	A	63	71	anti-parallel
Strand 3	A	77	85	anti-parallel
Strand 4	A	92	99	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	118	first strand
Strand 2	A	125	132	anti-parallel
Strand 3	A	141	147	anti-parallel
Strand 4	A	155	160	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	173	174	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	185	first strand
Strand 2	A	191	197	anti-parallel
Strand 3	A	202	208	anti-parallel
Strand 4	A	215	222	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	235	first strand
Strand 2	A	240	245	anti-parallel
Strand 3	A	259	260	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	257	first strand
Strand 2	A	271	273	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	290	first strand
Strand 2	A	295	303	anti-parallel
Strand 3	A	316	324	anti-parallel
Strand 4	A	330	331	anti-parallel

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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	361	first strand
Strand 2	A	394	398	anti-parallel
Strand 3	A	403	408	anti-parallel
Strand 4	A	440	447	anti-parallel
Strand 5	A	450	455	anti-parallel
Strand 6	A	488	492	anti-parallel
Strand 7	A	357	361	anti-parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	370	first strand
Strand 2	A	379	384	anti-parallel
Strand 3	A	426	437	anti-parallel
Strand 4	A	473	478	anti-parallel
Strand 5	A	461	464	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	370	first strand
Strand 2	A	379	384	anti-parallel
Strand 3	A	473	478	anti-parallel
Strand 4	A	426	437	anti-parallel
Strand 5	A	414	417	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	343	341	anti-parallel
Strand 3	B	346	349	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	60	first strand
Strand 2	B	63	71	anti-parallel
Strand 3	B	77	85	anti-parallel
Strand 4	B	92	99	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	118	first strand
Strand 2	B	125	132	anti-parallel
Strand 3	B	141	147	anti-parallel
Strand 4	B	155	160	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	185	first strand
Strand 2	B	191	197	anti-parallel
Strand 3	B	202	208	anti-parallel
Strand 4	B	215	222	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	228	236	first strand
Strand 2	B	239	246	anti-parallel
Strand 3	B	259	260	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	257	first strand
Strand 2	B	271	273	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	290	first strand
Strand 2	B	295	303	anti-parallel
Strand 3	B	316	326	anti-parallel
Strand 4	B	329	331	anti-parallel

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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	361	first strand
Strand 2	B	488	492	anti-parallel
Strand 3	B	450	451	anti-parallel

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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	417	first strand
Strand 2	B	426	437	anti-parallel
Strand 3	B	379	384	anti-parallel
Strand 4	B	473	478	anti-parallel
Strand 5	B	461	464	anti-parallel

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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	370	first strand
Strand 2	B	379	384	anti-parallel
Strand 3	B	426	437	anti-parallel
Strand 4	B	473	478	anti-parallel
Strand 5	B	461	464	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	398	first strand
Strand 2	B	403	408	anti-parallel
Strand 3	B	440	442	anti-parallel
Strand 4	B	454	455	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	37	first strand
Strand 2	C	343	341	anti-parallel
Strand 3	C	346	349	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	60	first strand
Strand 2	C	63	71	anti-parallel
Strand 3	C	77	85	anti-parallel
Strand 4	C	92	99	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	118	first strand
Strand 2	C	125	132	anti-parallel
Strand 3	C	141	147	anti-parallel
Strand 4	C	155	160	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	185	first strand
Strand 2	C	191	197	anti-parallel
Strand 3	C	202	208	anti-parallel
Strand 4	C	215	222	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	235	first strand
Strand 2	C	240	245	anti-parallel
Strand 3	C	255	260	anti-parallel
Strand 4	C	271	273	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	290	first strand
Strand 2	C	295	303	anti-parallel
Strand 3	C	316	324	anti-parallel
Strand 4	C	330	331	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	361	first strand
Strand 2	C	488	492	anti-parallel
Strand 3	C	450	455	anti-parallel
Strand 4	C	441	445	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	370	first strand
Strand 2	C	379	384	anti-parallel
Strand 3	C	428	437	anti-parallel
Strand 4	C	414	417	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	400	first strand
Strand 2	C	403	408	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	461	464	first strand
Strand 2	C	475	478	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	37	first strand
Strand 2	D	343	341	anti-parallel
Strand 3	D	346	349	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	60	first strand
Strand 2	D	63	71	anti-parallel
Strand 3	D	77	85	anti-parallel
Strand 4	D	92	99	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	118	first strand
Strand 2	D	125	132	anti-parallel
Strand 3	D	141	147	anti-parallel
Strand 4	D	155	160	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	170	first strand
Strand 2	D	173	174	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	185	first strand
Strand 2	D	191	197	anti-parallel
Strand 3	D	202	208	anti-parallel
Strand 4	D	215	222	anti-parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	228	235	first strand
Strand 2	D	240	246	anti-parallel
Strand 3	D	255	260	anti-parallel
Strand 4	D	271	273	anti-parallel

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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	282	289	first strand
Strand 2	D	296	303	anti-parallel
Strand 3	D	316	321	anti-parallel

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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	323	324	first strand
Strand 2	D	330	331	anti-parallel

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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	357	361	first strand
Strand 2	D	488	492	anti-parallel

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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	369	370	first strand
Strand 2	D	381	382	anti-parallel

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There are 2 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	394	398	first strand
Strand 2	D	410	408	anti-parallel

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There are 2 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	417	first strand
Strand 2	D	428	437	anti-parallel

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There are 2 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	461	464	first strand
Strand 2	D	475	478	anti-parallel

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There are 3 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	37	first strand
Strand 2	E	343	341	anti-parallel
Strand 3	E	346	349	anti-parallel

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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	60	first strand
Strand 2	E	63	68	anti-parallel
Strand 3	E	79	85	anti-parallel
Strand 4	E	92	99	anti-parallel

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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	118	first strand
Strand 2	E	125	132	anti-parallel
Strand 3	E	141	147	anti-parallel
Strand 4	E	155	160	anti-parallel

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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	185	first strand
Strand 2	E	191	197	anti-parallel
Strand 3	E	202	208	anti-parallel
Strand 4	E	215	222	anti-parallel

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There are 4 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	229	235	first strand
Strand 2	E	240	245	anti-parallel
Strand 3	E	256	260	anti-parallel
Strand 4	E	271	272	anti-parallel

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There are 4 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	282	290	first strand
Strand 2	E	295	303	anti-parallel
Strand 3	E	316	324	anti-parallel
Strand 4	E	330	331	anti-parallel

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There are 4 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	357	361	first strand
Strand 2	E	488	492	anti-parallel
Strand 3	E	450	455	anti-parallel
Strand 4	E	441	447	anti-parallel

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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	367	370	first strand
Strand 2	E	379	384	anti-parallel
Strand 3	E	428	437	anti-parallel
Strand 4	E	414	417	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	367	370	first strand
Strand 2	E	379	384	anti-parallel
Strand 3	E	473	478	anti-parallel
Strand 4	E	461	464	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	394	398	first strand
Strand 2	E	410	408	anti-parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	37	first strand
Strand 2	F	343	341	anti-parallel
Strand 3	F	346	349	anti-parallel

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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	60	first strand
Strand 2	F	63	71	anti-parallel
Strand 3	F	77	85	anti-parallel
Strand 4	F	92	99	anti-parallel

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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	109	118	first strand
Strand 2	F	125	133	anti-parallel
Strand 3	F	141	147	anti-parallel
Strand 4	F	155	160	anti-parallel

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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	181	185	first strand
Strand 2	F	191	197	anti-parallel
Strand 3	F	202	208	anti-parallel
Strand 4	F	215	222	anti-parallel

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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	229	236	first strand
Strand 2	F	239	245	anti-parallel
Strand 3	F	255	260	anti-parallel
Strand 4	F	271	273	anti-parallel

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There are 4 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	282	290	first strand
Strand 2	F	295	303	anti-parallel
Strand 3	F	316	324	anti-parallel
Strand 4	F	330	331	anti-parallel

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There are 4 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	357	361	first strand
Strand 2	F	488	492	anti-parallel
Strand 3	F	450	451	anti-parallel
Strand 4	F	445	447	anti-parallel

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There are 4 strands in BK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	367	370	first strand
Strand 2	F	379	384	anti-parallel
Strand 3	F	428	437	anti-parallel
Strand 4	F	414	417	anti-parallel

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There are 2 strands in BL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	394	398	first strand
Strand 2	F	410	408	anti-parallel

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There are 2 strands in BM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	441	442	first strand
Strand 2	F	454	455	anti-parallel

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There are 2 strands in BN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	461	464	first strand
Strand 2	F	475	478	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 3VT0

Analysis of interatomic Contacts of Structural Units in PDB entry:
3VT0