Analysis of interatomic Contacts of Structural Units in PDB entry:
3VXC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VXC entry

There are 2 chains in PDB entry 3VXC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 38LEU 435
B
 THR 38LEU 435
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3VXC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 61Right-handed alpha
Helix 2
2
A
62 68Right-handed alpha
Helix 3
3
A
78 80Right-handed 310
Helix 4
4
A
81 91Right-handed alpha
Helix 5
5
A
104 113Right-handed alpha
Helix 6
6
A
119 126Right-handed alpha
Helix 7
7
A
126 131Right-handed alpha
Helix 8
8
A
134 140Right-handed alpha
Helix 9
9
A
164 170Right-handed alpha
Helix 10
10
A
177 191Right-handed alpha
Helix 11
11
A
203 219Right-handed alpha
Helix 12
12
A
220 228Right-handed alpha
Helix 13
13
A
230 235Right-handed 310
Helix 14
14
A
236 252Right-handed alpha
Helix 15
15
A
258 262Right-handed 310
Helix 16
16
A
267 275Right-handed alpha
Helix 17
17
A
285 295Right-handed alpha
Helix 18
18
A
295 302Right-handed alpha
Helix 19
19
A
337 348Right-handed alpha
Helix 20
20
A
350 361Right-handed alpha
Helix 21
21
A
369 376Right-handed 310
Helix 22
22
A
378 392Right-handed alpha
Helix 23
23
A
398 403Right-handed alpha
Helix 24
24
A
404 420Right-handed alpha
Helix 25
25
A
424 434Right-handed alpha
Helix 26
26
B
48 62Right-handed alpha
Helix 27
27
B
62 68Right-handed alpha
Helix 28
28
B
78 80Right-handed 310
Helix 29
29
B
81 91Right-handed alpha
Helix 30
30
B
104 113Right-handed alpha
Helix 31
31
B
119 126Right-handed alpha
Helix 32
32
B
126 131Right-handed alpha
Helix 33
33
B
134 140Right-handed alpha
Helix 34
34
B
164 170Right-handed alpha
Helix 35
35
B
177 191Right-handed alpha
Helix 36
36
B
203 219Right-handed alpha
Helix 37
37
B
220 228Right-handed alpha
Helix 38
38
B
230 235Right-handed 310
Helix 39
39
B
236 252Right-handed alpha
Helix 40
40
B
258 262Right-handed 310
Helix 41
41
B
267 275Right-handed alpha
Helix 42
42
B
285 295Right-handed alpha
Helix 43
43
B
295 302Right-handed alpha
Helix 44
44
B
337 348Right-handed alpha
Helix 45
45
B
350 361Right-handed alpha
Helix 46
46
B
369 376Right-handed 310
Helix 47
47
B
378 392Right-handed alpha
Helix 48
48
B
398 403Right-handed alpha
Helix 49
49
B
404 420Right-handed alpha
Helix 50
50
B
424 434Right-handed alpha
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There are 8 sheets in PDB entry 3VXC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 77first strand
Strand 2
A
39 44parallel
Strand 3
A
98 101parallel
Strand 4
A
328 331anti-parallel
Strand 5
A
150 151anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
146 147anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 197first strand
Strand 2
A
278 284parallel
Strand 3
A
156 163anti-parallel
Strand 4
A
303 306anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 197first strand
Strand 2
A
278 284parallel
Strand 3
A
156 163anti-parallel
Strand 4
A
321 324anti-parallel
Strand 5
A
395 397parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 77first strand
Strand 2
B
39 44parallel
Strand 3
B
98 101parallel
Strand 4
B
328 331anti-parallel
Strand 5
B
150 151anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
146 147anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 196first strand
Strand 2
B
278 284parallel
Strand 3
B
156 163anti-parallel
Strand 4
B
303 306anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 196first strand
Strand 2
B
278 284parallel
Strand 3
B
156 163anti-parallel
Strand 4
B
321 324anti-parallel
Strand 5
B
395 397parallel
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