Analysis of interatomic Contacts of Structural Units in PDB entry:
3WD9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WD9 entry

There are 2 chains in PDB entry 3WD9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 154THR 511
B
 SER 154THR 511
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 3WD9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
162 170Right-handed alpha
Helix 2
2
A
171 173Right-handed 310
Helix 3
3
A
179 188Right-handed alpha
Helix 4
4
A
190 203Right-handed alpha
Helix 5
5
A
204 209Right-handed alpha
Helix 6
6
A
212 226Right-handed alpha
Helix 7
7
A
235 250Right-handed alpha
Helix 8
8
A
260 274Right-handed alpha
Helix 9
9
A
282 289Right-handed alpha
Helix 10
10
A
291 297Right-handed alpha
Helix 11
11
A
301 314Right-handed alpha
Helix 12
12
A
315 317Right-handed 310
Helix 13
13
A
327 345Right-handed alpha
Helix 14
14
A
346 348Right-handed 310
Helix 15
15
A
349 363Right-handed alpha
Helix 16
16
A
376 393Right-handed alpha
Helix 17
17
A
394 398Right-handed 310
Helix 18
18
A
399 424Right-handed alpha
Helix 19
19
A
438 450Right-handed alpha
Helix 20
20
A
450 462Right-handed alpha
Helix 21
21
A
466 483Right-handed alpha
Helix 22
22
A
501 509Right-handed alpha
Helix 23
23
B
161 170Right-handed alpha
Helix 24
24
B
171 173Right-handed 310
Helix 25
25
B
179 187Right-handed alpha
Helix 26
26
B
190 203Right-handed alpha
Helix 27
27
B
204 209Right-handed alpha
Helix 28
28
B
212 226Right-handed alpha
Helix 29
29
B
235 251Right-handed alpha
Helix 30
30
B
252 256Right-handed 310
Helix 31
31
B
260 274Right-handed alpha
Helix 32
32
B
282 289Right-handed alpha
Helix 33
33
B
291 297Right-handed alpha
Helix 34
34
B
301 314Right-handed alpha
Helix 35
35
B
315 317Right-handed 310
Helix 36
36
B
327 344Right-handed alpha
Helix 37
37
B
345 348Right-handed 310
Helix 38
38
B
349 362Right-handed alpha
Helix 39
39
B
376 393Right-handed alpha
Helix 40
40
B
394 398Right-handed 310
Helix 41
41
B
399 424Right-handed alpha
Helix 42
42
B
438 450Right-handed alpha
Helix 43
43
B
450 463Right-handed alpha
Helix 44
44
B
466 483Right-handed alpha
Helix 45
45
B
501 510Right-handed alpha
Back to top of page
There are no sheets in PDB entry 3WD9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il