Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZJU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3ZJU entry

There are 2 chains in PDB entry 3ZJU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 860
B	G 1	C 75

There are 37 helices in PDB entry 3ZJU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	6	22	Right-handed alpha
Helix 2	2	A	49	69	Right-handed alpha
Helix 3	3	A	84	93	Right-handed alpha
Helix 4	4	A	96	115	Right-handed alpha
Helix 5	5	A	120	124	Right-handed 310
Helix 6	6	A	129	147	Right-handed alpha
Helix 7	7	A	195	197	Right-handed 310
Helix 8	8	A	198	206	Right-handed alpha
Helix 9	9	A	207	209	Right-handed 310
Helix 10	10	A	213	225	Right-handed alpha
Helix 11	11	A	249	256	Right-handed 310
Helix 12	12	A	265	272	Right-handed alpha
Helix 13	13	A	275	285	Right-handed alpha
Helix 14	14	A	342	352	Right-handed alpha
Helix 15	15	A	384	388	Right-handed 310
Helix 16	16	A	391	406	Right-handed alpha
Helix 17	17	A	446	450	Right-handed 310
Helix 18	18	A	465	470	Right-handed alpha
Helix 19	19	A	470	474	Right-handed alpha
Helix 20	20	A	492	497	Right-handed 310
Helix 21	21	A	498	503	Right-handed alpha
Helix 22	22	A	514	522	Right-handed alpha
Helix 23	23	A	530	534	Right-handed 310
Helix 24	24	A	536	551	Right-handed alpha
Helix 25	25	A	587	591	Right-handed 310
Helix 26	26	A	629	638	Right-handed alpha
Helix 27	27	A	638	649	Right-handed alpha
Helix 28	28	A	659	682	Right-handed alpha
Helix 29	29	A	690	694	Right-handed 310
Helix 30	30	A	695	718	Right-handed alpha
Helix 31	31	A	721	737	Right-handed alpha
Helix 32	32	A	743	762	Right-handed alpha
Helix 33	33	A	765	776	Right-handed alpha
Helix 34	34	A	781	785	Right-handed 310
Helix 35	35	A	791	796	Right-handed alpha
Helix 36	36	A	821	831	Right-handed alpha
Helix 37	37	A	832	837	Right-handed alpha

There are 12 sheets in PDB entry 3ZJU. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	74	first strand
Strand 2	A	34	39	parallel
Strand 3	A	524	528	parallel
Strand 4	A	560	564	parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	79	first strand
Strand 2	A	125	126	parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	154	first strand
Strand 2	A	188	193	anti-parallel
Strand 3	A	420	421	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	247	first strand
Strand 2	A	226	236	anti-parallel

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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	337	first strand
Strand 2	A	258	261	anti-parallel
Strand 3	A	317	323	parallel
Strand 4	A	302	310	anti-parallel
Strand 5	A	226	236	anti-parallel
Strand 6	A	242	247	anti-parallel

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There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	337	first strand
Strand 2	A	258	261	anti-parallel
Strand 3	A	317	323	parallel
Strand 4	A	302	310	anti-parallel
Strand 5	A	226	236	anti-parallel
Strand 6	A	409	415	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	423	424	first strand
Strand 2	A	489	490	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	442	444	first strand
Strand 2	A	434	437	anti-parallel
Strand 3	A	482	485	anti-parallel
Strand 4	A	475	477	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	583	586	first strand
Strand 2	A	569	577	anti-parallel

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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	592	594	first strand
Strand 2	A	603	605	anti-parallel
Strand 3	A	611	619	anti-parallel
Strand 4	A	569	577	anti-parallel
Strand 5	A	583	586	anti-parallel

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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	592	594	first strand
Strand 2	A	603	605	anti-parallel
Strand 3	A	611	619	anti-parallel
Strand 4	A	569	577	anti-parallel
Strand 5	A	656	657	parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	809	817	first strand
Strand 2	A	799	806	anti-parallel
Strand 3	A	854	860	parallel
Strand 4	A	843	850	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3ZJU

Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZJU