Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZX0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3ZX0 entry

There are 4 chains in PDB entry 3ZX0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 48	MET 462
B	VAL 47	MET 462
C	VAL 47	ALA 465
D	ASN 46	PHE 163

There are 79 helices in PDB entry 3ZX0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	90	95	Right-handed 310
Helix 2	2	A	97	99	Right-handed 310
Helix 3	3	A	100	105	Right-handed alpha
Helix 4	4	A	105	116	Right-handed alpha
Helix 5	5	A	117	121	Right-handed 310
Helix 6	6	A	131	141	Right-handed alpha
Helix 7	7	A	141	158	Right-handed alpha
Helix 8	8	A	170	186	Right-handed alpha
Helix 9	9	A	256	269	Right-handed alpha
Helix 10	10	A	292	296	Right-handed alpha
Helix 11	11	A	297	305	Right-handed 310
Helix 12	12	A	320	330	Right-handed alpha
Helix 13	13	A	361	371	Right-handed alpha
Helix 14	14	A	379	393	Right-handed alpha
Helix 15	15	A	394	402	Right-handed alpha
Helix 16	16	A	406	411	Right-handed alpha
Helix 17	17	A	412	426	Right-handed alpha
Helix 18	18	A	431	436	Right-handed 310
Helix 19	19	A	450	459	Right-handed alpha
Helix 20	20	B	90	95	Right-handed 310
Helix 21	21	B	97	99	Right-handed 310
Helix 22	22	B	100	116	Right-handed alpha
Helix 23	23	B	117	121	Right-handed 310
Helix 24	24	B	131	141	Right-handed alpha
Helix 25	25	B	141	158	Right-handed alpha
Helix 26	26	B	170	186	Right-handed alpha
Helix 27	27	B	231	233	Right-handed 310
Helix 28	28	B	256	269	Right-handed alpha
Helix 29	29	B	270	274	Right-handed 310
Helix 30	30	B	292	296	Right-handed alpha
Helix 31	31	B	297	305	Right-handed 310
Helix 32	32	B	320	330	Right-handed alpha
Helix 33	33	B	361	371	Right-handed alpha
Helix 34	34	B	379	393	Right-handed alpha
Helix 35	35	B	394	402	Right-handed alpha
Helix 36	36	B	406	426	Right-handed alpha
Helix 37	37	B	431	436	Right-handed 310
Helix 38	38	B	451	461	Right-handed alpha
Helix 39	39	C	90	95	Right-handed 310
Helix 40	40	C	97	99	Right-handed 310
Helix 41	41	C	100	116	Right-handed alpha
Helix 42	42	C	117	122	Right-handed alpha
Helix 43	43	C	131	141	Right-handed alpha
Helix 44	44	C	141	158	Right-handed alpha
Helix 45	45	C	170	186	Right-handed alpha
Helix 46	46	C	225	229	Right-handed 310
Helix 47	47	C	231	233	Right-handed 310
Helix 48	48	C	256	269	Right-handed alpha
Helix 49	49	C	270	274	Right-handed 310
Helix 50	50	C	292	296	Right-handed alpha
Helix 51	51	C	297	305	Right-handed 310
Helix 52	52	C	320	330	Right-handed alpha
Helix 53	53	C	361	371	Right-handed alpha
Helix 54	54	C	379	392	Right-handed alpha
Helix 55	55	C	394	402	Right-handed alpha
Helix 56	56	C	406	426	Right-handed alpha
Helix 57	57	C	431	436	Right-handed 310
Helix 58	58	C	451	460	Right-handed alpha
Helix 59	59	D	90	95	Right-handed 310
Helix 60	60	D	97	99	Right-handed 310
Helix 61	61	D	100	105	Right-handed alpha
Helix 62	62	D	105	116	Right-handed alpha
Helix 63	63	D	117	121	Right-handed 310
Helix 64	64	D	131	141	Right-handed alpha
Helix 65	65	D	141	158	Right-handed alpha
Helix 66	66	D	170	186	Right-handed alpha
Helix 67	67	D	225	229	Right-handed 310
Helix 68	68	D	231	233	Right-handed 310
Helix 69	69	D	256	269	Right-handed alpha
Helix 70	70	D	292	296	Right-handed alpha
Helix 71	71	D	298	305	Right-handed 310
Helix 72	72	D	320	330	Right-handed alpha
Helix 73	73	D	360	372	Right-handed alpha
Helix 74	74	D	379	393	Right-handed alpha
Helix 75	75	D	394	402	Right-handed alpha
Helix 76	76	D	406	411	Right-handed alpha
Helix 77	77	D	412	426	Right-handed alpha
Helix 78	78	D	431	436	Right-handed 310
Helix 79	79	D	451	460	Right-handed alpha

There are 16 sheets in PDB entry 3ZX0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD, CA, CB, CC, CD, A, DB, C, DD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	85	first strand
Strand 2	A	60	66	anti-parallel
Strand 3	A	49	55	anti-parallel
Strand 4	A	125	130	parallel
Strand 5	A	162	168	parallel

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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	240	first strand
Strand 2	A	243	253	anti-parallel
Strand 3	A	217	222	anti-parallel
Strand 4	A	209	213	anti-parallel
Strand 5	A	356	360	parallel
Strand 6	A	438	440	parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	279	first strand
Strand 2	A	312	317	parallel
Strand 3	A	287	291	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	443	444	first strand
Strand 2	A	447	448	anti-parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	85	first strand
Strand 2	B	60	67	anti-parallel
Strand 3	B	48	55	anti-parallel
Strand 4	B	125	130	parallel
Strand 5	B	162	168	parallel

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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	240	first strand
Strand 2	B	243	253	anti-parallel
Strand 3	B	217	222	anti-parallel
Strand 4	B	209	213	anti-parallel
Strand 5	B	356	360	parallel
Strand 6	B	438	440	parallel

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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	279	first strand
Strand 2	B	312	317	parallel
Strand 3	B	287	291	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	443	444	first strand
Strand 2	B	447	448	anti-parallel

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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	85	first strand
Strand 2	C	60	67	anti-parallel
Strand 3	C	48	55	anti-parallel
Strand 4	C	125	130	parallel
Strand 5	C	162	168	parallel

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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	240	first strand
Strand 2	C	243	253	anti-parallel
Strand 3	C	217	222	anti-parallel
Strand 4	C	209	213	anti-parallel
Strand 5	C	356	360	parallel
Strand 6	C	438	440	parallel

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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	279	first strand
Strand 2	C	312	317	parallel
Strand 3	C	287	291	anti-parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	443	444	first strand
Strand 2	C	447	448	anti-parallel

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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	79	86	first strand
Strand 2	D	60	67	anti-parallel
Strand 3	D	48	55	anti-parallel
Strand 4	D	125	130	parallel
Strand 5	D	162	168	parallel

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There are 6 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	235	239	first strand
Strand 2	D	244	253	anti-parallel
Strand 3	D	217	222	anti-parallel
Strand 4	D	209	213	anti-parallel
Strand 5	D	356	358	parallel
Strand 6	D	438	440	parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	276	279	first strand
Strand 2	D	312	317	parallel
Strand 3	D	287	291	anti-parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	443	444	first strand
Strand 2	D	447	448	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3ZX0

Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZX0