Analysis of interatomic Contacts of Structural Units in PDB entry:
4A59

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4A59 entry

There are 3 chains in PDB entry 4A59 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 37	GLU 629
B	ALA 36	LEU 628
C	LYS 40	VAL 133

There are 95 helices in PDB entry 4A59. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	37	56	Right-handed alpha
Helix 2	2	A	97	100	Right-handed 310
Helix 3	3	A	111	124	Right-handed alpha
Helix 4	4	A	125	130	Right-handed 310
Helix 5	5	A	134	140	Right-handed 310
Helix 6	6	A	141	168	Right-handed alpha
Helix 7	7	A	169	180	Right-handed alpha
Helix 8	8	A	197	211	Right-handed alpha
Helix 9	9	A	232	248	Right-handed alpha
Helix 10	10	A	325	327	Right-handed 310
Helix 11	11	A	328	341	Right-handed alpha
Helix 12	12	A	383	386	Right-handed 310
Helix 13	13	A	389	396	Right-handed alpha
Helix 14	14	A	400	406	Right-handed alpha
Helix 15	15	A	408	415	Right-handed alpha
Helix 16	16	A	423	429	Right-handed alpha
Helix 17	17	A	441	453	Right-handed alpha
Helix 18	18	A	473	481	Right-handed alpha
Helix 19	19	A	491	504	Right-handed alpha
Helix 20	20	A	514	527	Right-handed alpha
Helix 21	21	A	556	573	Right-handed alpha
Helix 22	22	A	600	610	Right-handed alpha
Helix 23	23	A	611	620	Right-handed alpha
Helix 24	24	A	623	628	Right-handed 310
Helix 25	25	B	37	58	Right-handed alpha
Helix 26	26	B	111	124	Right-handed alpha
Helix 27	27	B	134	140	Right-handed 310
Helix 28	28	B	141	168	Right-handed alpha
Helix 29	29	B	169	180	Right-handed alpha
Helix 30	30	B	190	194	Right-handed 310
Helix 31	31	B	197	211	Right-handed alpha
Helix 32	32	B	214	218	Right-handed 310
Helix 33	33	B	232	248	Right-handed alpha
Helix 34	34	B	325	327	Right-handed 310
Helix 35	35	B	328	341	Right-handed alpha
Helix 36	36	B	383	386	Right-handed 310
Helix 37	37	B	389	396	Right-handed alpha
Helix 38	38	B	406	416	Right-handed alpha
Helix 39	39	B	423	429	Right-handed alpha
Helix 40	40	B	441	453	Right-handed alpha
Helix 41	41	B	473	481	Right-handed alpha
Helix 42	42	B	491	504	Right-handed alpha
Helix 43	43	B	514	527	Right-handed alpha
Helix 44	44	B	556	573	Right-handed alpha
Helix 45	45	B	600	610	Right-handed alpha
Helix 46	46	B	611	620	Right-handed alpha
Helix 47	47	B	623	628	Right-handed 310
Helix 48	48	C	41	58	Right-handed alpha
Helix 49	49	C	97	100	Right-handed 310
Helix 50	50	C	111	124	Right-handed alpha
Helix 51	51	C	134	140	Right-handed 310
Helix 52	52	C	141	168	Right-handed alpha
Helix 53	53	C	169	180	Right-handed alpha
Helix 54	54	C	197	211	Right-handed alpha
Helix 55	55	C	214	218	Right-handed 310
Helix 56	56	C	232	248	Right-handed alpha
Helix 57	57	C	325	327	Right-handed 310
Helix 58	58	C	328	341	Right-handed alpha
Helix 59	59	C	383	386	Right-handed 310
Helix 60	60	C	389	396	Right-handed alpha
Helix 61	61	C	401	406	Right-handed alpha
Helix 62	62	C	407	415	Right-handed alpha
Helix 63	63	C	423	429	Right-handed alpha
Helix 64	64	C	441	453	Right-handed alpha
Helix 65	65	C	473	481	Right-handed alpha
Helix 66	66	C	491	504	Right-handed alpha
Helix 67	67	C	514	527	Right-handed alpha
Helix 68	68	C	542	545	Right-handed 310
Helix 69	69	C	557	573	Right-handed alpha
Helix 70	70	C	600	610	Right-handed alpha
Helix 71	71	C	611	620	Right-handed alpha
Helix 72	72	C	623	628	Right-handed 310
Helix 73	73	D	35	58	Right-handed alpha
Helix 74	74	D	111	124	Right-handed alpha
Helix 75	75	D	134	140	Right-handed 310
Helix 76	76	D	141	168	Right-handed alpha
Helix 77	77	D	169	180	Right-handed alpha
Helix 78	78	D	190	194	Right-handed 310
Helix 79	79	D	197	211	Right-handed alpha
Helix 80	80	D	214	218	Right-handed 310
Helix 81	81	D	232	248	Right-handed alpha
Helix 82	82	D	328	341	Right-handed alpha
Helix 83	83	D	383	386	Right-handed 310
Helix 84	84	D	389	396	Right-handed alpha
Helix 85	85	D	401	406	Right-handed alpha
Helix 86	86	D	407	416	Right-handed alpha
Helix 87	87	D	423	429	Right-handed alpha
Helix 88	88	D	441	453	Right-handed alpha
Helix 89	89	D	473	481	Right-handed alpha
Helix 90	90	D	491	504	Right-handed alpha
Helix 91	91	D	514	527	Right-handed alpha
Helix 92	92	D	557	574	Right-handed alpha
Helix 93	93	D	600	610	Right-handed alpha
Helix 94	94	D	611	620	Right-handed alpha
Helix 95	95	D	623	628	Right-handed 310

There are 41 sheets in PDB entry 4A59. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, A, DB, C, DD, DE, DF, G, DH, DI, DJ,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	95	first strand
Strand 2	A	75	88	parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	105	first strand
Strand 2	A	75	88	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	75	88	parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	222	first strand
Strand 2	A	181	187	parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	181	187	parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	260	first strand
Strand 2	A	266	269	anti-parallel

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There are 6 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	303	first strand
Strand 2	A	318	324	anti-parallel
Strand 3	A	283	288	anti-parallel
Strand 4	A	274	278	anti-parallel
Strand 5	A	487	490	parallel
Strand 6	A	581	583	parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	348	first strand
Strand 2	A	350	354	anti-parallel
Strand 3	A	433	438	parallel
Strand 4	A	362	364	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	372	first strand
Strand 2	A	378	380	anti-parallel

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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	529	533	first strand
Strand 2	A	536	540	anti-parallel
Strand 3	A	547	549	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	105	first strand
Strand 2	B	75	88	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	75	88	parallel

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There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	222	first strand
Strand 2	B	181	187	parallel
Strand 3	B	60	71	parallel
Strand 4	B	75	88	anti-parallel
Strand 5	B	92	105	anti-parallel

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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	222	first strand
Strand 2	B	181	187	parallel
Strand 3	B	60	71	parallel
Strand 4	B	75	88	anti-parallel
Strand 5	B	109	110	parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	257	260	first strand
Strand 2	B	266	269	anti-parallel

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There are 6 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	302	303	first strand
Strand 2	B	318	324	anti-parallel
Strand 3	B	283	288	anti-parallel
Strand 4	B	274	278	anti-parallel
Strand 5	B	487	490	parallel
Strand 6	B	581	583	parallel

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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	348	first strand
Strand 2	B	350	354	anti-parallel
Strand 3	B	433	438	parallel
Strand 4	B	362	364	anti-parallel

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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	372	first strand
Strand 2	B	378	380	anti-parallel

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There are 3 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	529	533	first strand
Strand 2	B	536	540	anti-parallel
Strand 3	B	547	549	anti-parallel

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There are 2 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	586	588	first strand
Strand 2	B	594	597	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	95	first strand
Strand 2	C	75	88	parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	105	first strand
Strand 2	C	75	88	anti-parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	110	first strand
Strand 2	C	75	88	parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	221	222	first strand
Strand 2	C	181	187	parallel

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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	230	first strand
Strand 2	C	181	187	parallel

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There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	257	260	first strand
Strand 2	C	266	269	anti-parallel

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There are 6 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	302	303	first strand
Strand 2	C	318	324	anti-parallel
Strand 3	C	283	288	anti-parallel
Strand 4	C	274	278	anti-parallel
Strand 5	C	487	490	parallel
Strand 6	C	581	583	parallel

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There are 4 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	348	first strand
Strand 2	C	351	354	anti-parallel
Strand 3	C	435	438	parallel
Strand 4	C	362	364	anti-parallel

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There are 2 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	370	372	first strand
Strand 2	C	378	380	anti-parallel

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There are 3 strands in CJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	529	533	first strand
Strand 2	C	536	540	anti-parallel
Strand 3	C	547	549	anti-parallel

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There are 2 strands in CK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	586	588	first strand
Strand 2	C	594	597	anti-parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	105	first strand
Strand 2	D	75	88	anti-parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	110	first strand
Strand 2	D	75	88	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	221	222	first strand
Strand 2	D	181	187	parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	230	first strand
Strand 2	D	181	187	anti-parallel

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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	257	260	first strand
Strand 2	D	266	269	anti-parallel

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There are 6 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	302	303	first strand
Strand 2	D	318	324	anti-parallel
Strand 3	D	283	288	anti-parallel
Strand 4	D	274	278	anti-parallel
Strand 5	D	487	490	parallel
Strand 6	D	581	583	parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	348	first strand
Strand 2	D	351	354	anti-parallel
Strand 3	D	435	438	parallel
Strand 4	D	362	364	anti-parallel

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There are 2 strands in DH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	370	372	first strand
Strand 2	D	378	380	anti-parallel

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There are 3 strands in DI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	529	532	first strand
Strand 2	D	537	540	anti-parallel
Strand 3	D	547	549	anti-parallel

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There are 2 strands in DJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	586	588	first strand
Strand 2	D	594	597	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4A59

Analysis of interatomic Contacts of Structural Units in PDB entry:
4A59