Analysis of interatomic Contacts of Structural Units in PDB entry:
4AQF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4AQF entry

There are 3 chains in PDB entry 4AQF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 476
B
 GLU 2ASN 475
C
 ALA 0LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 87 helices in PDB entry 4AQF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 25Right-handed alpha
Helix 2
2
A
43 52Right-handed alpha
Helix 3
3
A
55 73Right-handed alpha
Helix 4
4
A
76 85Right-handed alpha
Helix 5
5
A
85 99Right-handed alpha
Helix 6
6
A
99 108Right-handed alpha
Helix 7
7
A
109 114Right-handed alpha
Helix 8
8
A
119 138Right-handed alpha
Helix 9
9
A
142 146Right-handed 310
Helix 10
10
A
159 161Right-handed 310
Helix 11
11
A
162 182Right-handed alpha
Helix 12
12
A
195 206Right-handed alpha
Helix 13
13
A
208 214Right-handed 310
Helix 14
14
A
229 243Right-handed alpha
Helix 15
15
A
244 264Right-handed alpha
Helix 16
16
A
269 293Right-handed alpha
Helix 17
17
A
294 302Right-handed alpha
Helix 18
18
A
305 317Right-handed alpha
Helix 19
19
A
323 337Right-handed alpha
Helix 20
20
A
340 351Right-handed alpha
Helix 21
21
A
354 363Right-handed alpha
Helix 22
22
A
371 375Right-handed 310
Helix 23
23
A
381 383Right-handed 310
Helix 24
24
A
384 394Right-handed alpha
Helix 25
25
A
399 406Right-handed 310
Helix 26
26
A
409 415Right-handed 310
Helix 27
27
A
419 423Right-handed 310
Helix 28
28
A
424 441Right-handed alpha
Helix 29
29
A
442 446Right-handed 310
Helix 30
30
A
449 460Right-handed alpha
Helix 31
31
B
9 25Right-handed alpha
Helix 32
32
B
43 53Right-handed alpha
Helix 33
33
B
55 74Right-handed alpha
Helix 34
34
B
76 85Right-handed alpha
Helix 35
35
B
85 99Right-handed alpha
Helix 36
36
B
99 108Right-handed alpha
Helix 37
37
B
109 114Right-handed alpha
Helix 38
38
B
119 138Right-handed alpha
Helix 39
39
B
159 161Right-handed 310
Helix 40
40
B
162 183Right-handed alpha
Helix 41
41
B
195 206Right-handed alpha
Helix 42
42
B
208 214Right-handed 310
Helix 43
43
B
229 243Right-handed alpha
Helix 44
44
B
244 264Right-handed alpha
Helix 45
45
B
265 267Right-handed 310
Helix 46
46
B
269 294Right-handed alpha
Helix 47
47
B
294 301Right-handed alpha
Helix 48
48
B
305 318Right-handed alpha
Helix 49
49
B
323 337Right-handed alpha
Helix 50
50
B
340 351Right-handed alpha
Helix 51
51
B
353 362Right-handed alpha
Helix 52
52
B
371 375Right-handed 310
Helix 53
53
B
381 383Right-handed 310
Helix 54
54
B
384 394Right-handed alpha
Helix 55
55
B
399 406Right-handed 310
Helix 56
56
B
409 415Right-handed 310
Helix 57
57
B
424 441Right-handed alpha
Helix 58
58
B
442 446Right-handed 310
Helix 59
59
B
449 461Right-handed alpha
Helix 60
60
C
9 25Right-handed alpha
Helix 61
61
C
43 52Right-handed alpha
Helix 62
62
C
55 72Right-handed alpha
Helix 63
63
C
76 85Right-handed alpha
Helix 64
64
C
85 99Right-handed alpha
Helix 65
65
C
99 108Right-handed alpha
Helix 66
66
C
109 116Right-handed alpha
Helix 67
67
C
119 138Right-handed alpha
Helix 68
68
C
142 146Right-handed 310
Helix 69
69
C
162 183Right-handed alpha
Helix 70
70
C
195 206Right-handed alpha
Helix 71
71
C
208 214Right-handed 310
Helix 72
72
C
229 243Right-handed alpha
Helix 73
73
C
244 264Right-handed alpha
Helix 74
74
C
269 293Right-handed alpha
Helix 75
75
C
294 303Right-handed alpha
Helix 76
76
C
305 318Right-handed alpha
Helix 77
77
C
323 337Right-handed alpha
Helix 78
78
C
340 351Right-handed alpha
Helix 79
79
C
353 363Right-handed alpha
Helix 80
80
C
371 375Right-handed 310
Helix 81
81
C
384 394Right-handed alpha
Helix 82
82
C
399 406Right-handed 310
Helix 83
83
C
409 415Right-handed 310
Helix 84
84
C
419 423Right-handed 310
Helix 85
85
C
424 441Right-handed alpha
Helix 86
86
C
442 446Right-handed 310
Helix 87
87
C
449 460Right-handed alpha
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There are no sheets in PDB entry 4AQF
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