Analysis of interatomic Contacts of Structural Units in PDB entry:
4B62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B62 entry

There is 1 chain in PDB entry 4B62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 304GLU 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 4B62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
308 311Right-handed 310
Helix 2
2
A
312 318Right-handed alpha
Helix 3
3
A
337 339Right-handed 310
Helix 4
4
A
348 350Right-handed 310
Helix 5
5
A
351 365Right-handed alpha
Helix 6
6
A
387 408Right-handed alpha
Helix 7
7
A
429 437Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 4B62.

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
329 335anti-parallel
Strand 3
A
438 444anti-parallel
Strand 4
A
369 374anti-parallel
Strand 5
A
413 417parallel
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