Analysis of interatomic Contacts of Structural Units in PDB entry:
4BFC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BFC entry

There is 1 chain in PDB entry 4BFC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 218ARG 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4BFC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
218 232Right-handed alpha
Helix 2
2
A
233 237Right-handed 310
Helix 3
3
A
248 264Right-handed alpha
Helix 4
4
A
275 277Right-handed 310
Helix 5
5
A
278 289Right-handed alpha
Helix 6
6
A
297 299Right-handed 310
Helix 7
7
A
316 324Right-handed alpha
Helix 8
8
A
342 348Right-handed alpha
Helix 9
9
A
358 360Right-handed 310
Helix 10
10
A
361 371Right-handed alpha
Helix 11
11
A
379 393Right-handed alpha
Helix 12
12
A
393 410Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 4BFC.

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
293 295first strand
Strand 2
A
308 310parallel
Strand 3
A
267 273parallel
Strand 4
A
238 245parallel
Strand 5
A
326 329parallel
Strand 6
A
352 354parallel
Strand 7
A
375 376parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il