Analysis of interatomic Contacts of Structural Units in PDB entry:
4BHW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BHW entry

There are 2 chains in PDB entry 4BHW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 1046ASP 1664
B
LYS 1046ASP 1664
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 4BHW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1050 1067Right-handed alpha
Helix 2
2
A
1072 1076Right-handed 310
Helix 3
3
A
1081 1085Right-handed 310
Helix 4
4
A
1098 1109Right-handed alpha
Helix 5
5
A
1113 1132Right-handed alpha
Helix 6
6
A
1136 1160Right-handed alpha
Helix 7
7
A
1202 1207Right-handed alpha
Helix 8
8
A
1229 1231Right-handed 310
Helix 9
9
A
1256 1260Right-handed alpha
Helix 10
10
A
1272 1278Right-handed alpha
Helix 11
11
A
1296 1314Right-handed alpha
Helix 12
12
A
1336 1344Right-handed alpha
Helix 13
13
A
1406 1408Right-handed 310
Helix 14
14
A
1409 1429Right-handed alpha
Helix 15
15
A
1459 1477Right-handed alpha
Helix 16
16
A
1486 1493Right-handed alpha
Helix 17
17
A
1497 1501Right-handed 310
Helix 18
18
A
1507 1521Right-handed alpha
Helix 19
19
A
1583 1591Right-handed alpha
Helix 20
20
A
1602 1607Right-handed 310
Helix 21
21
A
1621 1625Right-handed 310
Helix 22
22
A
1627 1638Right-handed alpha
Helix 23
23
A
1643 1663Right-handed alpha
Helix 24
24
B
1050 1067Right-handed alpha
Helix 25
25
B
1072 1076Right-handed 310
Helix 26
26
B
1080 1085Right-handed alpha
Helix 27
27
B
1088 1093Right-handed alpha
Helix 28
28
B
1098 1109Right-handed alpha
Helix 29
29
B
1113 1132Right-handed alpha
Helix 30
30
B
1137 1160Right-handed alpha
Helix 31
31
B
1202 1207Right-handed alpha
Helix 32
32
B
1256 1260Right-handed alpha
Helix 33
33
B
1272 1278Right-handed alpha
Helix 34
34
B
1296 1314Right-handed alpha
Helix 35
35
B
1336 1343Right-handed alpha
Helix 36
36
B
1406 1408Right-handed 310
Helix 37
37
B
1409 1429Right-handed alpha
Helix 38
38
B
1459 1477Right-handed alpha
Helix 39
39
B
1486 1493Right-handed alpha
Helix 40
40
B
1497 1501Right-handed 310
Helix 41
41
B
1507 1520Right-handed alpha
Helix 42
42
B
1583 1591Right-handed alpha
Helix 43
43
B
1602 1609Right-handed 310
Helix 44
44
B
1621 1625Right-handed 310
Helix 45
45
B
1627 1638Right-handed alpha
Helix 46
46
B
1643 1663Right-handed alpha
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There are 12 sheets in PDB entry 4BHW. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1169 1170first strand
Strand 2
A
1240 1241anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1175 1176first strand
Strand 2
A
1184 1185anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1198 1201first strand
Strand 2
A
1190 1194anti-parallel
Strand 3
A
1232 1235anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1212 1214first strand
Strand 2
A
1225 1227anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1244 1246first strand
Strand 2
A
1253 1255anti-parallel
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There are 7 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1321 1334first strand
Strand 2
A
1352 1366anti-parallel
Strand 3
A
1369 1381anti-parallel
Strand 4
A
1392 1400anti-parallel
Strand 5
A
1432 1436parallel
Strand 6
A
1595 1599anti-parallel
Strand 7
A
1482 1485anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1169 1170first strand
Strand 2
B
1240 1241anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1175 1176first strand
Strand 2
B
1184 1185anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1198 1201first strand
Strand 2
B
1190 1194anti-parallel
Strand 3
B
1232 1235anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1212 1213first strand
Strand 2
B
1226 1227anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1244 1246first strand
Strand 2
B
1253 1255anti-parallel
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There are 7 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1321 1334first strand
Strand 2
B
1352 1366anti-parallel
Strand 3
B
1369 1381anti-parallel
Strand 4
B
1392 1400anti-parallel
Strand 5
B
1432 1436parallel
Strand 6
B
1595 1599anti-parallel
Strand 7
B
1482 1485anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il