Analysis of interatomic Contacts of Structural Units in PDB entry:
4BN2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BN2 entry

There are 3 chains in PDB entry 4BN2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 10GLY 361
B
 GLY 10GLY 361
C
 GLY 10ASP 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4BN2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
67 85Right-handed alpha
Helix 2
2
A
100 106Right-handed alpha
Helix 3
3
A
120 137Right-handed alpha
Helix 4
4
A
193 213Right-handed alpha
Helix 5
5
A
275 293Right-handed alpha
Helix 6
6
A
300 303Right-handed 310
Helix 7
7
A
304 310Right-handed alpha
Helix 8
8
A
311 314Right-handed 310
Helix 9
9
A
329 331Right-handed 310
Helix 10
10
A
332 347Right-handed alpha
Helix 11
11
B
67 85Right-handed alpha
Helix 12
12
B
100 106Right-handed alpha
Helix 13
13
B
115 119Right-handed 310
Helix 14
14
B
120 137Right-handed alpha
Helix 15
15
B
193 213Right-handed alpha
Helix 16
16
B
275 293Right-handed alpha
Helix 17
17
B
300 303Right-handed 310
Helix 18
18
B
304 310Right-handed alpha
Helix 19
19
B
311 314Right-handed 310
Helix 20
20
B
329 331Right-handed 310
Helix 21
21
B
332 347Right-handed alpha
Helix 22
22
C
67 85Right-handed alpha
Helix 23
23
C
100 106Right-handed alpha
Helix 24
24
C
120 137Right-handed alpha
Helix 25
25
C
193 213Right-handed alpha
Helix 26
26
C
275 293Right-handed alpha
Helix 27
27
C
304 310Right-handed alpha
Helix 28
28
C
329 331Right-handed 310
Helix 29
29
C
332 347Right-handed alpha
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There are 22 sheets in PDB entry 4BN2. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE, BF, BG, BH, CA, CB, CC, CD, CE, CF,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
350 351anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
14 19parallel
Strand 3
A
319 326parallel
Strand 4
A
89 94parallel
Strand 5
A
239 251parallel
Strand 6
A
359 360anti-parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
14 19parallel
Strand 3
A
319 326parallel
Strand 4
A
89 94parallel
Strand 5
A
239 251parallel
Strand 6
A
222 236anti-parallel
Strand 7
A
144 156anti-parallel
Strand 8
A
160 162anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
14 19parallel
Strand 3
A
319 326parallel
Strand 4
A
89 94parallel
Strand 5
A
239 251parallel
Strand 6
A
222 236anti-parallel
Strand 7
A
144 156anti-parallel
Strand 8
A
189 190anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
144 156anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 360first strand
Strand 2
A
239 251anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
44 47anti-parallel
Strand 3
A
54 57anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
181 184anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
350 351anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
14 19parallel
Strand 3
B
319 326parallel
Strand 4
B
89 94parallel
Strand 5
B
239 251parallel
Strand 6
B
359 360anti-parallel
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There are 8 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
14 19parallel
Strand 3
B
319 326parallel
Strand 4
B
89 94parallel
Strand 5
B
239 251parallel
Strand 6
B
222 236anti-parallel
Strand 7
B
144 156anti-parallel
Strand 8
B
160 162anti-parallel
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There are 8 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
14 19parallel
Strand 3
B
319 326parallel
Strand 4
B
89 94parallel
Strand 5
B
239 251parallel
Strand 6
B
222 236anti-parallel
Strand 7
B
144 156anti-parallel
Strand 8
B
189 190anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 162first strand
Strand 2
B
144 156anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 360first strand
Strand 2
B
239 251anti-parallel
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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 41first strand
Strand 2
B
44 47anti-parallel
Strand 3
B
54 57anti-parallel
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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 175first strand
Strand 2
B
181 184anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
350 351anti-parallel
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There are 8 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 62first strand
Strand 2
C
14 19parallel
Strand 3
C
319 326parallel
Strand 4
C
89 95parallel
Strand 5
C
243 251parallel
Strand 6
C
222 233anti-parallel
Strand 7
C
145 156anti-parallel
Strand 8
C
160 162anti-parallel
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There are 8 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 62first strand
Strand 2
C
14 19parallel
Strand 3
C
319 326parallel
Strand 4
C
89 95parallel
Strand 5
C
243 251parallel
Strand 6
C
222 233anti-parallel
Strand 7
C
145 156anti-parallel
Strand 8
C
189 191anti-parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 162first strand
Strand 2
C
145 156anti-parallel
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There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 41first strand
Strand 2
C
44 47anti-parallel
Strand 3
C
54 57anti-parallel
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There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
172 175first strand
Strand 2
C
181 184anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il