Analysis of interatomic Contacts of Structural Units in PDB entry:
4BVL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BVL entry

There are 4 chains in PDB entry 4BVL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1TYR 342
B
 LEU 1TYR 342
C
 LEU 1TYR 342
D
 LEU 1TYR 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 4BVL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 58Right-handed 310
Helix 2
2
A
72 80Right-handed alpha
Helix 3
3
A
94 100Right-handed alpha
Helix 4
4
A
101 104Right-handed 310
Helix 5
5
A
107 126Right-handed alpha
Helix 6
6
A
136 150Right-handed alpha
Helix 7
7
A
151 153Right-handed 310
Helix 8
8
A
170 175Right-handed alpha
Helix 9
9
A
181 185Right-handed 310
Helix 10
10
A
220 222Right-handed 310
Helix 11
11
A
223 228Right-handed alpha
Helix 12
12
A
238 241Right-handed 310
Helix 13
13
A
242 247Right-handed alpha
Helix 14
14
A
254 258Right-handed 310
Helix 15
15
A
286 290Right-handed 310
Helix 16
16
A
307 312Right-handed alpha
Helix 17
17
A
313 323Right-handed alpha
Helix 18
18
A
326 332Right-handed 310
Helix 19
19
B
52 58Right-handed 310
Helix 20
20
B
72 80Right-handed alpha
Helix 21
21
B
94 100Right-handed alpha
Helix 22
22
B
101 104Right-handed 310
Helix 23
23
B
107 126Right-handed alpha
Helix 24
24
B
136 150Right-handed alpha
Helix 25
25
B
151 153Right-handed 310
Helix 26
26
B
170 175Right-handed alpha
Helix 27
27
B
181 185Right-handed 310
Helix 28
28
B
220 222Right-handed 310
Helix 29
29
B
223 228Right-handed alpha
Helix 30
30
B
238 242Right-handed 310
Helix 31
31
B
254 258Right-handed 310
Helix 32
32
B
286 290Right-handed 310
Helix 33
33
B
307 312Right-handed alpha
Helix 34
34
B
313 323Right-handed alpha
Helix 35
35
B
326 332Right-handed 310
Helix 36
36
C
52 58Right-handed 310
Helix 37
37
C
72 80Right-handed alpha
Helix 38
38
C
94 100Right-handed alpha
Helix 39
39
C
101 104Right-handed 310
Helix 40
40
C
107 126Right-handed alpha
Helix 41
41
C
136 150Right-handed alpha
Helix 42
42
C
151 153Right-handed 310
Helix 43
43
C
170 175Right-handed alpha
Helix 44
44
C
181 185Right-handed 310
Helix 45
45
C
220 222Right-handed 310
Helix 46
46
C
223 228Right-handed alpha
Helix 47
47
C
238 242Right-handed 310
Helix 48
48
C
254 258Right-handed 310
Helix 49
49
C
286 290Right-handed 310
Helix 50
50
C
307 312Right-handed alpha
Helix 51
51
C
313 323Right-handed alpha
Helix 52
52
C
326 332Right-handed 310
Helix 53
53
D
52 58Right-handed 310
Helix 54
54
D
72 80Right-handed alpha
Helix 55
55
D
94 100Right-handed alpha
Helix 56
56
D
101 104Right-handed 310
Helix 57
57
D
107 126Right-handed alpha
Helix 58
58
D
136 150Right-handed alpha
Helix 59
59
D
151 153Right-handed 310
Helix 60
60
D
170 175Right-handed alpha
Helix 61
61
D
181 185Right-handed 310
Helix 62
62
D
220 222Right-handed 310
Helix 63
63
D
223 228Right-handed alpha
Helix 64
64
D
238 242Right-handed 310
Helix 65
65
D
254 258Right-handed 310
Helix 66
66
D
286 290Right-handed 310
Helix 67
67
D
307 312Right-handed alpha
Helix 68
68
D
313 323Right-handed alpha
Helix 69
69
D
326 332Right-handed 310
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There are 5 sheets in PDB entry 4BVL. Click on sheet of interest to get list of strands forming it: AA, BA, BB, CA, A,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
30 32parallel
Strand 3
A
87 90anti-parallel
Strand 4
A
43 46parallel
Strand 5
A
130 135parallel
Strand 6
A
155 161parallel
Strand 7
A
232 237parallel
Strand 8
A
268 273parallel
Strand 9
A
340 341anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
10 11anti-parallel
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There are 9 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
30 32parallel
Strand 3
B
87 90anti-parallel
Strand 4
B
43 46parallel
Strand 5
B
130 135parallel
Strand 6
B
155 161parallel
Strand 7
B
232 237parallel
Strand 8
B
268 273parallel
Strand 9
B
340 341anti-parallel
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There are 9 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 18first strand
Strand 2
C
30 32parallel
Strand 3
C
87 90anti-parallel
Strand 4
C
43 46parallel
Strand 5
C
130 135parallel
Strand 6
C
155 161parallel
Strand 7
C
232 237parallel
Strand 8
C
268 273parallel
Strand 9
C
340 341anti-parallel
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There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 18first strand
Strand 2
D
30 32parallel
Strand 3
D
87 90anti-parallel
Strand 4
D
43 46parallel
Strand 5
D
130 135parallel
Strand 6
D
155 161parallel
Strand 7
D
232 237parallel
Strand 8
D
268 273parallel
Strand 9
D
340 341anti-parallel
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