Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4BY8 entry
There are 6 chains in PDB entry 4BY8
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
ALA 2 | ALA 2 |
A
|
ALA 6 | GLN 7 |
A
|
VAL 9 | VAL 9 |
A
|
GLY 11 | GLY 11 |
A
|
PRO 14 | VAL 15 |
A
|
GLN 18 | GLN 19 |
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There is 1
helix in PDB entry 4BY8. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
0 | A
| 1 |
19 | Right-handed alpha |
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There are no sheets in PDB entry
4BY8
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il