Analysis of interatomic Contacts of Structural Units in PDB entry:
4CGY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CGY entry

There are 2 chains in PDB entry 4CGY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 21THR 639
B
 ASN 2LEU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 4CGY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 31Right-handed alpha
Helix 2
2
A
42 55Right-handed alpha
Helix 3
3
A
99 104Right-handed alpha
Helix 4
4
A
105 108Right-handed 310
Helix 5
5
A
109 115Right-handed 310
Helix 6
6
A
123 125Right-handed 310
Helix 7
7
A
126 140Right-handed alpha
Helix 8
8
A
150 166Right-handed alpha
Helix 9
9
A
182 192Right-handed alpha
Helix 10
10
A
197 230Right-handed alpha
Helix 11
11
A
230 235Right-handed alpha
Helix 12
12
A
244 262Right-handed alpha
Helix 13
13
A
292 305Right-handed alpha
Helix 14
14
A
328 339Right-handed alpha
Helix 15
15
A
343 357Right-handed alpha
Helix 16
16
A
375 382Right-handed alpha
Helix 17
17
A
389 399Right-handed alpha
Helix 18
18
A
427 445Right-handed alpha
Helix 19
19
A
475 480Right-handed 310
Helix 20
20
A
519 531Right-handed alpha
Helix 21
21
A
537 548Right-handed alpha
Helix 22
22
A
562 574Right-handed alpha
Helix 23
23
A
582 597Right-handed alpha
Helix 24
24
A
601 623Right-handed alpha
Helix 25
25
A
624 636Right-handed alpha
Helix 26
26
B
3 19Right-handed alpha
Helix 27
27
B
23 38Right-handed alpha
Helix 28
28
B
44 59Right-handed alpha
Helix 29
29
B
60 64Right-handed 310
Helix 30
30
B
98 107Right-handed alpha
Helix 31
31
B
112 116Right-handed 310
Helix 32
32
B
183 185Right-handed 310
Helix 33
33
B
194 201Right-handed alpha
Helix 34
34
B
202 211Right-handed alpha
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There are 5 sheets in PDB entry 4CGY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
70 77anti-parallel
Strand 3
A
80 88anti-parallel
Strand 4
A
35 40parallel
Strand 5
A
142 146parallel
Strand 6
A
172 175parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 98first strand
Strand 2
A
118 121anti-parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 500first strand
Strand 2
A
309 321anti-parallel
Strand 3
A
449 460anti-parallel
Strand 4
A
463 474anti-parallel
Strand 5
A
279 285anti-parallel
Strand 6
A
266 276anti-parallel
Strand 7
A
504 511anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
551 553first strand
Strand 2
A
559 561anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
173 176anti-parallel
Strand 3
B
179 182anti-parallel
Strand 4
B
145 150parallel
Strand 5
B
135 140anti-parallel
Strand 6
B
85 94anti-parallel
Strand 7
B
166 169anti-parallel
Strand 8
B
187 191anti-parallel
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