Analysis of interatomic Contacts of Structural Units in PDB entry:
4E70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E70 entry

There are 2 chains in PDB entry 4E70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1PRO 368
B
GLY 993PRO 1368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4E70. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
3 20Right-handed alpha
Helix 2
2
A
22 34Right-handed alpha
Helix 3
3
A
37 44Right-handed alpha
Helix 4
4
A
50 56Right-handed alpha
Helix 5
5
A
64 77Right-handed alpha
Helix 6
6
A
116 122Right-handed alpha
Helix 7
7
A
125 128Right-handed alpha
Helix 8
8
A
134 138Right-handed alpha
Helix 9
9
A
151 154Right-handed alpha
Helix 10
10
A
161 167Right-handed alpha
Helix 11
11
A
169 193Right-handed alpha
Helix 12
12
A
213 221Right-handed alpha
Helix 13
13
A
275 288Right-handed alpha
Helix 14
14
A
313 329Right-handed alpha
Helix 15
15
A
337 347Right-handed alpha
Helix 16
16
B
1003 1020Right-handed alpha
Helix 17
17
B
1022 1034Right-handed alpha
Helix 18
18
B
1037 1044Right-handed alpha
Helix 19
19
B
1050 1056Right-handed alpha
Helix 20
20
B
1064 1077Right-handed alpha
Helix 21
21
B
1116 1122Right-handed alpha
Helix 22
22
B
1125 1128Right-handed alpha
Helix 23
23
B
1134 1138Right-handed alpha
Helix 24
24
B
1151 1154Right-handed alpha
Helix 25
25
B
1161 1167Right-handed alpha
Helix 26
26
B
1169 1193Right-handed alpha
Helix 27
27
B
1213 1221Right-handed alpha
Helix 28
28
B
1275 1288Right-handed alpha
Helix 29
29
B
1313 1329Right-handed alpha
Helix 30
30
B
1337 1347Right-handed alpha
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There are 4 sheets in PDB entry 4E70. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 49first strand
Strand 2
A
97 100anti-parallel
Strand 3
A
80 83anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
246 250first strand
Strand 2
A
226 231parallel
Strand 3
A
203 207parallel
Strand 4
A
263 267parallel
Strand 5
A
297 302parallel
Strand 6
A
361 367anti-parallel
Strand 7
A
351 358anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1048 1049first strand
Strand 2
B
1097 1100anti-parallel
Strand 3
B
1080 1083anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1246 1250first strand
Strand 2
B
1226 1231parallel
Strand 3
B
1203 1207parallel
Strand 4
B
1263 1267parallel
Strand 5
B
1297 1302parallel
Strand 6
B
1361 1367anti-parallel
Strand 7
B
1351 1358anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il