Analysis of interatomic Contacts of Structural Units in PDB entry:
4EAB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EAB entry

There is 1 chain in PDB entry 4EAB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3ASP 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4EAB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 29Right-handed alpha
Helix 2
2
A
54 56Right-handed 310
Helix 3
3
A
57 64Right-handed alpha
Helix 4
4
A
75 89Right-handed alpha
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There are 4 sheets in PDB entry 4EAB. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
33 37parallel
Strand 4
A
10 13parallel
Strand 5
A
68 71parallel
Strand 6
A
92 93parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
114 115parallel
Strand 3
A
132 133parallel
Strand 4
A
150 151parallel
Strand 5
A
168 169parallel
Strand 6
A
186 187parallel
Strand 7
A
202 204parallel
Strand 8
A
209 210anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
120 121parallel
Strand 3
A
138 139parallel
Strand 4
A
156 157parallel
Strand 5
A
174 175parallel
Strand 6
A
192 193parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
126 127parallel
Strand 3
A
144 145parallel
Strand 4
A
162 163parallel
Strand 5
A
180 181parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il