Analysis of interatomic Contacts of Structural Units in PDB entry:
4EIT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EIT entry

There are 6 chains in PDB entry 4EIT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6VAL 262
B
 GLY 4ALA 261
C
 GLY 4ALA 261
D
 GLY 6ALA 261
E
 ASN 5ALA 261
F
 GLY 6ASN 121
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 80 helices in PDB entry 4EIT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 35Right-handed alpha
Helix 2
2
A
45 59Right-handed alpha
Helix 3
3
A
71 87Right-handed alpha
Helix 4
4
A
100 105Right-handed alpha
Helix 5
5
A
107 111Right-handed 310
Helix 6
6
A
112 124Right-handed alpha
Helix 7
7
A
124 138Right-handed alpha
Helix 8
8
A
149 153Right-handed 310
Helix 9
9
A
159 181Right-handed alpha
Helix 10
10
A
207 217Right-handed alpha
Helix 11
11
A
224 237Right-handed alpha
Helix 12
12
A
238 241Right-handed 310
Helix 13
13
A
253 257Right-handed 310
Helix 14
14
B
23 35Right-handed alpha
Helix 15
15
B
49 59Right-handed alpha
Helix 16
16
B
71 87Right-handed alpha
Helix 17
17
B
100 105Right-handed alpha
Helix 18
18
B
107 111Right-handed 310
Helix 19
19
B
112 124Right-handed alpha
Helix 20
20
B
124 138Right-handed alpha
Helix 21
21
B
149 153Right-handed 310
Helix 22
22
B
159 181Right-handed alpha
Helix 23
23
B
206 217Right-handed alpha
Helix 24
24
B
224 237Right-handed alpha
Helix 25
25
B
238 241Right-handed 310
Helix 26
26
B
253 257Right-handed 310
Helix 27
27
C
23 35Right-handed alpha
Helix 28
28
C
45 59Right-handed alpha
Helix 29
29
C
71 87Right-handed alpha
Helix 30
30
C
100 105Right-handed alpha
Helix 31
31
C
107 111Right-handed 310
Helix 32
32
C
112 124Right-handed alpha
Helix 33
33
C
124 138Right-handed alpha
Helix 34
34
C
149 153Right-handed 310
Helix 35
35
C
159 181Right-handed alpha
Helix 36
36
C
207 217Right-handed alpha
Helix 37
37
C
224 237Right-handed alpha
Helix 38
38
C
238 241Right-handed 310
Helix 39
39
C
253 257Right-handed 310
Helix 40
40
D
23 35Right-handed alpha
Helix 41
41
D
45 59Right-handed alpha
Helix 42
42
D
71 87Right-handed alpha
Helix 43
43
D
100 105Right-handed alpha
Helix 44
44
D
107 111Right-handed 310
Helix 45
45
D
112 124Right-handed alpha
Helix 46
46
D
124 136Right-handed alpha
Helix 47
47
D
149 153Right-handed 310
Helix 48
48
D
159 181Right-handed alpha
Helix 49
49
D
182 184Right-handed 310
Helix 50
50
D
206 217Right-handed alpha
Helix 51
51
D
224 237Right-handed alpha
Helix 52
52
D
238 241Right-handed 310
Helix 53
53
D
253 257Right-handed 310
Helix 54
54
E
23 35Right-handed alpha
Helix 55
55
E
45 59Right-handed alpha
Helix 56
56
E
71 87Right-handed alpha
Helix 57
57
E
100 105Right-handed alpha
Helix 58
58
E
107 111Right-handed 310
Helix 59
59
E
112 124Right-handed alpha
Helix 60
60
E
124 137Right-handed alpha
Helix 61
61
E
149 153Right-handed 310
Helix 62
62
E
159 181Right-handed alpha
Helix 63
63
E
182 184Right-handed 310
Helix 64
64
E
206 217Right-handed alpha
Helix 65
65
E
224 237Right-handed alpha
Helix 66
66
E
238 241Right-handed 310
Helix 67
67
E
253 257Right-handed 310
Helix 68
68
F
23 35Right-handed alpha
Helix 69
69
F
45 59Right-handed alpha
Helix 70
70
F
71 87Right-handed alpha
Helix 71
71
F
100 105Right-handed alpha
Helix 72
72
F
107 111Right-handed 310
Helix 73
73
F
112 124Right-handed alpha
Helix 74
74
F
124 138Right-handed alpha
Helix 75
75
F
149 153Right-handed 310
Helix 76
76
F
159 181Right-handed alpha
Helix 77
77
F
206 217Right-handed alpha
Helix 78
78
F
224 237Right-handed alpha
Helix 79
79
F
238 241Right-handed 310
Helix 80
80
F
253 257Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 4EIT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
38 43parallel
Strand 3
A
12 16parallel
Strand 4
A
91 94parallel
Strand 5
A
142 148parallel
Strand 6
A
185 192parallel
Strand 7
A
247 250parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
38 43parallel
Strand 3
B
12 16parallel
Strand 4
B
91 94parallel
Strand 5
B
142 148parallel
Strand 6
B
185 192parallel
Strand 7
B
247 250parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 66first strand
Strand 2
C
38 43parallel
Strand 3
C
12 16parallel
Strand 4
C
91 94parallel
Strand 5
C
142 148parallel
Strand 6
C
185 192parallel
Strand 7
C
247 250parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 66first strand
Strand 2
D
38 43parallel
Strand 3
D
12 16parallel
Strand 4
D
89 94parallel
Strand 5
D
138 148parallel
Strand 6
D
186 192parallel
Strand 7
D
247 250parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
62 66first strand
Strand 2
E
38 43parallel
Strand 3
E
12 16parallel
Strand 4
E
89 94parallel
Strand 5
E
138 148parallel
Strand 6
E
186 192parallel
Strand 7
E
247 250parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
62 66first strand
Strand 2
F
38 43parallel
Strand 3
F
12 16parallel
Strand 4
F
91 94parallel
Strand 5
F
142 148parallel
Strand 6
F
185 192parallel
Strand 7
F
247 250parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il