Analysis of interatomic Contacts of Structural Units in PDB entry:
4F70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F70 entry

There are 2 chains in PDB entry 4F70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 0LEU 359
B
 LYS -1PRO 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 4F70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 13Right-handed alpha
Helix 2
2
A
15 19Right-handed alpha
Helix 3
3
A
60 71Right-handed alpha
Helix 4
4
A
104 114Right-handed alpha
Helix 5
5
A
124 145Right-handed alpha
Helix 6
6
A
153 155Right-handed 310
Helix 7
7
A
201 206Right-handed alpha
Helix 8
8
A
212 230Right-handed alpha
Helix 9
9
A
248 260Right-handed alpha
Helix 10
10
A
267 273Right-handed 310
Helix 11
11
A
275 283Right-handed alpha
Helix 12
12
A
284 289Right-handed 310
Helix 13
13
A
292 300Right-handed alpha
Helix 14
14
A
306 316Right-handed alpha
Helix 15
15
A
319 323Right-handed 310
Helix 16
16
A
325 331Right-handed alpha
Helix 17
17
A
332 336Right-handed 310
Helix 18
18
B
4 7Right-handed 310
Helix 19
19
B
8 15Right-handed alpha
Helix 20
20
B
17 26Right-handed alpha
Helix 21
21
B
27 31Right-handed 310
Helix 22
22
B
33 55Right-handed alpha
Helix 23
23
B
58 76Right-handed alpha
Helix 24
24
B
82 98Right-handed alpha
Helix 25
25
B
104 120Right-handed alpha
Helix 26
26
B
131 146Right-handed alpha
Helix 27
27
B
155 167Right-handed alpha
Helix 28
28
B
168 184Right-handed alpha
Helix 29
29
B
187 192Right-handed alpha
Helix 30
30
B
193 209Right-handed alpha
Helix 31
31
B
213 219Right-handed alpha
Helix 32
32
B
223 244Right-handed alpha
Helix 33
33
B
245 257Right-handed alpha
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There are 3 sheets in PDB entry 4F70. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
26 29anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
49 54anti-parallel
Strand 4
A
92 98anti-parallel
Strand 5
A
81 87anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
157 159anti-parallel
Strand 3
A
169 171anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il