Analysis of interatomic Contacts of Structural Units in PDB entry:
4F7G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F7G entry

There are 2 chains in PDB entry 4F7G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 209LEU 400
B
 ALA 1655VAL 1824
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4F7G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
210 225Right-handed alpha
Helix 2
2
A
231 248Right-handed alpha
Helix 3
3
A
261 265Right-handed 310
Helix 4
4
A
267 274Right-handed 310
Helix 5
5
A
275 285Right-handed alpha
Helix 6
6
A
290 304Right-handed alpha
Helix 7
7
A
354 356Right-handed 310
Helix 8
8
A
384 399Right-handed alpha
Helix 9
9
B
1657 1684Right-handed alpha
Helix 10
10
B
1694 1723Right-handed alpha
Helix 11
11
B
1723 1737Right-handed alpha
Helix 12
12
B
1737 1752Right-handed alpha
Helix 13
13
B
1754 1783Right-handed alpha
Helix 14
14
B
1789 1821Right-handed alpha
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There are 2 sheets in PDB entry 4F7G. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 318first strand
Strand 2
A
325 332anti-parallel
Strand 3
A
336 340anti-parallel
Strand 4
A
347 352anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 361first strand
Strand 2
A
365 369anti-parallel
Strand 3
A
378 381anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il