Analysis of interatomic Contacts of Structural Units in PDB entry:
4F93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F93 entry

There is 1 chain in PDB entry 4F93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 403VAL 1645
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 4F93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
410 415Right-handed alpha
Helix 2
2
B
418 422Right-handed 310
Helix 3
3
B
482 488Right-handed alpha
Helix 4
4
B
488 494Right-handed alpha
Helix 5
5
B
508 523Right-handed alpha
Helix 6
6
B
544 559Right-handed alpha
Helix 7
7
B
560 563Right-handed 310
Helix 8
8
B
589 597Right-handed alpha
Helix 9
9
B
617 622Right-handed 310
Helix 10
10
B
624 643Right-handed alpha
Helix 11
11
B
657 665Right-handed alpha
Helix 12
12
B
677 681Right-handed 310
Helix 13
13
B
696 714Right-handed alpha
Helix 14
14
B
729 745Right-handed alpha
Helix 15
15
B
762 767Right-handed alpha
Helix 16
16
B
793 803Right-handed alpha
Helix 17
17
B
813 819Right-handed alpha
Helix 18
18
B
845 854Right-handed alpha
Helix 19
19
B
877 884Right-handed alpha
Helix 20
20
B
892 895Right-handed 310
Helix 21
21
B
896 908Right-handed alpha
Helix 22
22
B
912 921Right-handed alpha
Helix 23
23
B
923 932Right-handed alpha
Helix 24
24
B
933 937Right-handed 310
Helix 25
25
B
939 946Right-handed alpha
Helix 26
26
B
949 967Right-handed alpha
Helix 27
27
B
982 992Right-handed alpha
Helix 28
28
B
994 1005Right-handed alpha
Helix 29
29
B
1010 1019Right-handed alpha
Helix 30
30
B
1020 1025Right-handed 310
Helix 31
31
B
1030 1032Right-handed 310
Helix 32
32
B
1033 1042Right-handed alpha
Helix 33
33
B
1054 1069Right-handed alpha
Helix 34
34
B
1076 1087Right-handed alpha
Helix 35
35
B
1087 1102Right-handed alpha
Helix 36
36
B
1104 1121Right-handed alpha
Helix 37
37
B
1127 1132Right-handed 310
Helix 38
38
B
1136 1146Right-handed alpha
Helix 39
39
B
1149 1156Right-handed 310
Helix 40
40
B
1157 1166Right-handed alpha
Helix 41
41
B
1170 1179Right-handed alpha
Helix 42
42
B
1244 1246Right-handed 310
Helix 43
43
B
1310 1312Right-handed 310
Helix 44
44
B
1314 1323Right-handed alpha
Helix 45
45
B
1329 1341Right-handed alpha
Helix 46
46
B
1355 1371Right-handed alpha
Helix 47
47
B
1382 1398Right-handed alpha
Helix 48
48
B
1411 1422Right-handed alpha
Helix 49
49
B
1428 1437Right-handed alpha
Helix 50
50
B
1442 1447Right-handed alpha
Helix 51
51
B
1455 1461Right-handed 310
Helix 52
52
B
1463 1479Right-handed alpha
Helix 53
53
B
1496 1505Right-handed alpha
Helix 54
54
B
1515 1519Right-handed 310
Helix 55
55
B
1534 1541Right-handed alpha
Helix 56
56
B
1542 1554Right-handed alpha
Helix 57
57
B
1565 1583Right-handed alpha
Helix 58
58
B
1593 1602Right-handed alpha
Helix 59
59
B
1607 1614Right-handed alpha
Helix 60
60
B
1625 1638Right-handed alpha
Helix 61
61
B
1649 1652Right-handed 310
Helix 62
62
B
1680 1690Right-handed alpha
Helix 63
63
B
1708 1718Right-handed alpha
Helix 64
64
B
1727 1731Right-handed 310
Helix 65
65
B
1732 1742Right-handed alpha
Helix 66
66
B
1747 1756Right-handed alpha
Helix 67
67
B
1758 1767Right-handed alpha
Helix 68
68
B
1768 1771Right-handed 310
Helix 69
69
B
1778 1799Right-handed alpha
Helix 70
70
B
1813 1823Right-handed alpha
Helix 71
71
B
1825 1836Right-handed alpha
Helix 72
72
B
1841 1851Right-handed alpha
Helix 73
73
B
1852 1858Right-handed 310
Helix 74
74
B
1864 1873Right-handed alpha
Helix 75
75
B
1886 1900Right-handed alpha
Helix 76
76
B
1905 1917Right-handed alpha
Helix 77
77
B
1918 1933Right-handed alpha
Helix 78
78
B
1936 1951Right-handed alpha
Helix 79
79
B
1958 1963Right-handed 310
Helix 80
80
B
1967 1976Right-handed alpha
Helix 81
81
B
1981 1988Right-handed alpha
Helix 82
82
B
1989 1995Right-handed alpha
Helix 83
83
B
2000 2011Right-handed alpha
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There are 13 sheets in PDB entry 4F93. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
442 447first strand
Strand 2
B
685 692anti-parallel
Strand 3
B
865 872parallel
Strand 4
B
825 828parallel
Strand 5
B
721 725parallel
Strand 6
B
808 812parallel
Strand 7
B
782 785parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
566 568first strand
Strand 2
B
585 588parallel
Strand 3
B
537 541parallel
Strand 4
B
609 615parallel
Strand 5
B
647 652parallel
Strand 6
B
499 502parallel
Strand 7
B
673 675parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
832 835first strand
Strand 2
B
840 843anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
970 972first strand
Strand 2
B
979 981anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1184 1192first strand
Strand 2
B
1197 1206anti-parallel
Strand 3
B
1250 1257anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1233 1242first strand
Strand 2
B
1218 1226anti-parallel
Strand 3
B
1265 1272anti-parallel
Strand 4
B
1279 1285anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1307 1308first strand
Strand 2
B
1327 1328anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1405 1407first strand
Strand 2
B
1424 1427parallel
Strand 3
B
1376 1379parallel
Strand 4
B
1450 1453parallel
Strand 5
B
1486 1491parallel
Strand 6
B
1346 1349parallel
Strand 7
B
1511 1513parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1523 1530first strand
Strand 2
B
1700 1707parallel
Strand 3
B
1660 1664parallel
Strand 4
B
1559 1563parallel
Strand 5
B
1643 1647parallel
Strand 6
B
1617 1620parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1667 1670first strand
Strand 2
B
1675 1678anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1802 1805first strand
Strand 2
B
1809 1812anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2019 2024first strand
Strand 2
B
2034 2042anti-parallel
Strand 3
B
2087 2095anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2075 2082first strand
Strand 2
B
2064 2070anti-parallel
Strand 3
B
2102 2110anti-parallel
Strand 4
B
2118 2124anti-parallel
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