Analysis of interatomic Contacts of Structural Units in PDB entry:
4F9E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F9E entry

There is 1 chain in PDB entry 4F9E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 154LYS 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4F9E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
155 166Right-handed alpha
Helix 2
2
A
167 172Right-handed alpha
Helix 3
3
A
174 186Right-handed alpha
Helix 4
4
A
211 215Right-handed 310
Helix 5
5
A
264 272Right-handed alpha
Helix 6
6
A
273 278Right-handed 310
Helix 7
7
A
280 301Right-handed alpha
Helix 8
8
A
304 308Right-handed alpha
Helix 9
9
A
324 336Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4F9E.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 224first strand
Strand 2
A
243 249anti-parallel
Strand 3
A
252 261anti-parallel
Strand 4
A
198 203parallel
Strand 5
A
309 314parallel
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