Analysis of interatomic Contacts of Structural Units in PDB entry:
4FBA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FBA entry

There are 4 chains in PDB entry 4FBA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LYS 281
B
 LYS 4LYS 281
C
 LYS 4LYS 281
D
 LYS 4LYS 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 4FBA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 39Right-handed alpha
Helix 2
2
A
117 123Right-handed alpha
Helix 3
3
A
126 131Right-handed 310
Helix 4
4
A
134 147Right-handed alpha
Helix 5
5
A
155 173Right-handed alpha
Helix 6
6
A
173 179Right-handed alpha
Helix 7
7
A
179 188Right-handed alpha
Helix 8
8
A
203 212Right-handed alpha
Helix 9
9
A
212 223Right-handed alpha
Helix 10
10
A
239 243Right-handed 310
Helix 11
11
A
246 254Right-handed alpha
Helix 12
12
A
267 278Right-handed alpha
Helix 13
13
B
23 39Right-handed alpha
Helix 14
14
B
117 123Right-handed alpha
Helix 15
15
B
126 131Right-handed 310
Helix 16
16
B
135 147Right-handed alpha
Helix 17
17
B
155 173Right-handed alpha
Helix 18
18
B
173 179Right-handed alpha
Helix 19
19
B
179 188Right-handed alpha
Helix 20
20
B
203 212Right-handed alpha
Helix 21
21
B
212 222Right-handed alpha
Helix 22
22
B
223 225Right-handed 310
Helix 23
23
B
239 243Right-handed 310
Helix 24
24
B
246 254Right-handed alpha
Helix 25
25
B
267 278Right-handed alpha
Helix 26
26
C
23 39Right-handed alpha
Helix 27
27
C
117 122Right-handed alpha
Helix 28
28
C
124 131Right-handed 310
Helix 29
29
C
134 147Right-handed alpha
Helix 30
30
C
155 173Right-handed alpha
Helix 31
31
C
173 179Right-handed alpha
Helix 32
32
C
179 188Right-handed alpha
Helix 33
33
C
203 211Right-handed alpha
Helix 34
34
C
212 223Right-handed alpha
Helix 35
35
C
239 243Right-handed 310
Helix 36
36
C
246 254Right-handed alpha
Helix 37
37
C
267 278Right-handed alpha
Helix 38
38
D
23 39Right-handed alpha
Helix 39
39
D
117 123Right-handed alpha
Helix 40
40
D
124 131Right-handed 310
Helix 41
41
D
135 147Right-handed alpha
Helix 42
42
D
149 153Right-handed 310
Helix 43
43
D
155 173Right-handed alpha
Helix 44
44
D
173 179Right-handed alpha
Helix 45
45
D
179 188Right-handed alpha
Helix 46
46
D
203 211Right-handed alpha
Helix 47
47
D
212 222Right-handed alpha
Helix 48
48
D
223 225Right-handed 310
Helix 49
49
D
239 243Right-handed 310
Helix 50
50
D
246 254Right-handed alpha
Helix 51
51
D
267 278Right-handed alpha
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There are 10 sheets in PDB entry 4FBA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 19first strand
Strand 2
A
63 69parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
88 92anti-parallel
Strand 5
A
98 100anti-parallel
Strand 6
A
110 111parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
48 49anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 202first strand
Strand 2
B
199 202anti-parallel
Strand 3
B
133 134anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 19first strand
Strand 2
B
63 69parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
88 92anti-parallel
Strand 5
B
98 100anti-parallel
Strand 6
B
110 111parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 45first strand
Strand 2
B
48 49anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 19first strand
Strand 2
C
63 69parallel
Strand 3
C
77 82anti-parallel
Strand 4
C
88 92anti-parallel
Strand 5
C
98 100anti-parallel
Strand 6
C
110 111parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 45first strand
Strand 2
C
48 49anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 19first strand
Strand 2
D
63 69parallel
Strand 3
D
77 82anti-parallel
Strand 4
D
88 92anti-parallel
Strand 5
D
98 100anti-parallel
Strand 6
D
110 111parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 45first strand
Strand 2
D
48 49anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
133 134first strand
Strand 2
D
199 200anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il